Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Thyroid/c1/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Thyroid for cell cluster c1
Description
Labels
  • assay: SHARE-seq
  • cluster: Thyroid_c1
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Thyroid
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Thyroid_c1_obs_pval_signal float

liu2026Multiomics_Thyroid_c1_obs_pval_signal

Macs2 p-value signal track for observed accessibility
HISTOGRAM FOR liu2026Multiomics_Thyroid_c1_obs_pval_signal [0, 1.43e+03]
n
3,087,185,555
mean
0.396
sd
1.79

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308718555596.20% 26878367
chr1 248946354 >99.99% 2535018
chr2 242183489 >99.99% 1992755
chr3 198220523 99.96% 1605265
chr4 190204502 99.99% 1114092
chr5 181473459 99.96% 1258050
chr6 170739010 99.96% 1413741
chr7 159335736 99.99% 1287925
chr8 145075845 99.96% 1122676
chr9 138237307 99.89% 1240530
chr10 133787439 99.99% 1258836
chr11 135076531 99.99% 1490624
chr12 133264832 99.99% 1299397
chr13 114353928 99.99% 569919
chr14 106883494 99.85% 920391
chr15 101981161 99.99% 845240
chr16 90215392 99.86% 1138287
chr17 83247265 99.99% 1507760
chr18 80263246 99.86% 497689
chr19 58607593 99.98% 1473290
chr20 64332065 99.83% 781295
chr21 46699953 99.98% 301573
chr22 50808344 99.98% 741494
chrX 156030787 99.99% 480969
chrY 57217300 99.98% 1551
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 26878367 1 30298846 114.86 16
global segment-length histogram

Files

Filename Size md5
Thyroid_c1__obs_pval_signal.bw 156.58 MB 4de4d5cb60deac3f548ee0a5d9febb98
genomic_resource.yaml 1.24 KB 11f8cf49db78a31354b2d79213ea711e
statistics/