Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Thyroid/c2/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Thyroid for cell cluster c2 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Thyroid_c2_mean_counts_contribs | float |
liu2026Multiomics_Thyroid_c2_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.056, 0.167] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 124828028 | 3.89% | 123906498 |
| chr1 | 11682905 | 4.69% | 11596565 |
| chr2 | 9767347 | 4.03% | 9694754 |
| chr3 | 7945297 | 4.01% | 7885985 |
| chr4 | 5937764 | 3.12% | 5890360 |
| chr5 | 6627232 | 3.65% | 6578194 |
| chr6 | 7099239 | 4.16% | 7047628 |
| chr7 | 6287263 | 3.95% | 6241150 |
| chr8 | 5468812 | 3.77% | 5428612 |
| chr9 | 5719057 | 4.13% | 5677386 |
| chr10 | 6040333 | 4.51% | 5995971 |
| chr11 | 6573539 | 4.87% | 6526162 |
| chr12 | 5882083 | 4.41% | 5838817 |
| chr13 | 3131611 | 2.74% | 3107611 |
| chr14 | 4291740 | 4.01% | 4260493 |
| chr15 | 4070257 | 3.99% | 4039859 |
| chr16 | 4586854 | 5.08% | 4554585 |
| chr17 | 5784019 | 6.95% | 5743965 |
| chr18 | 2734285 | 3.40% | 2712186 |
| chr19 | 4661917 | 7.95% | 4629592 |
| chr20 | 3412892 | 5.30% | 3388947 |
| chr21 | 1329469 | 2.85% | 1318209 |
| chr22 | 2598206 | 5.11% | 2580031 |
| chrX | 3051290 | 1.96% | 3027998 |
| chrY | 144617 | 0.25% | 141438 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 123906498 | 1 | 2114 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Thyroid_c2__mean_counts_contribs.bw | 768.48 MB | 05b10f900a8e5140b0244c509c667f47 |
| genomic_resource.yaml | 1.32 KB | 99ba7a193dc1629aca744e51acb1cc66 |
| statistics/ |
