Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Thyroid/c2/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Thyroid for cell cluster c2
Description
Labels
  • assay: SHARE-seq
  • cluster: Thyroid_c2
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Thyroid
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Thyroid_c2_mean_pred_corrected float

liu2026Multiomics_Thyroid_c2_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Thyroid_c2_mean_pred_corrected [0.000905, 8.14]
n
64,992,424
mean
0.0809
sd
0.133

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 649924242.03% 64991466
chr1 6090969 2.45% 6090969
chr2 5076639 2.10% 5076637
chr3 4126087 2.08% 4126086
chr4 3080575 1.62% 3080575
chr5 3432999 1.89% 3432998
chr6 3730426 2.18% 3730425
chr7 3258535 2.04% 3258534
chr8 2842464 1.96% 2842464
chr9 2962287 2.14% 2962287
chr10 3140517 2.35% 3140516
chr11 3417129 2.53% 3417128
chr12 3073456 2.31% 3073456
chr13 1619849 1.42% 1619849
chr14 2242730 2.10% 2242730
chr15 2113120 2.07% 2113119
chr16 2384548 2.64% 2384545
chr17 3041055 3.65% 3041054
chr18 1417124 1.76% 1417123
chr19 2466149 4.21% 2466149
chr20 1779230 2.76% 1779230
chr21 691056 1.48% 691055
chr22 1345319 2.65% 1345318
chrX 1584559 1.02% 1584556
chrY 75602 0.13% 74663
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 64991466 1 910 1 1
global segment-length histogram

Files

Filename Size md5
Thyroid_c2__mean_pred_corrected.bw 493.44 MB 02683144389147d5c1dc0b534af0bf75
genomic_resource.yaml 1.28 KB 7ab6fb9a377563f565e281a53b4c2dd1
statistics/