Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Thyroid/c2/obs_pval_signalcontent_copy
Type position_score
Version 0
Summary obs_pval_signal for Thyroid for cell cluster c2
Description
Labels
  • assay: SHARE-seq
  • cluster: Thyroid_c2
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Thyroid
  • processing_level: obs_pval
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Thyroid_c2_obs_pval_signal float

liu2026Multiomics_Thyroid_c2_obs_pval_signal

Macs2 p-value signal track for observed accessibility
HISTOGRAM FOR liu2026Multiomics_Thyroid_c2_obs_pval_signal [0, 274]
n
3,087,046,250
mean
0.606
sd
1.34

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 308704625096.19% 21723737
chr1 248946462 >99.99% 2001913
chr2 242183500 >99.99% 1673687
chr3 198179164 99.94% 1345313
chr4 190204502 99.99% 1030136
chr5 181359192 99.90% 1063111
chr6 170738166 99.96% 1228256
chr7 159335931 99.99% 1073667
chr8 145075503 99.96% 972219
chr9 138242606 99.89% 985171
chr10 133787409 99.99% 1027842
chr11 135076531 99.99% 1170560
chr12 133265010 99.99% 1046709
chr13 114354193 99.99% 515285
chr14 106883494 99.85% 755210
chr15 101981166 99.99% 675715
chr16 90225571 99.88% 840277
chr17 83247307 99.99% 1093550
chr18 80263246 99.86% 456554
chr19 58607587 99.98% 1004431
chr20 64333553 99.83% 591320
chr21 46699934 99.98% 232464
chr22 50808149 99.98% 507206
chrX 156030780 99.99% 410648
chrY 57217294 99.98% 22493
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 21723737 1 30006161 142.1 23
global segment-length histogram

Files

Filename Size md5
Thyroid_c2__obs_pval_signal.bw 127.05 MB 2871e2af683649a5b8e2fd19085c250f
genomic_resource.yaml 1.24 KB 37680f3f1a2733a7a00b1ddb23660480
statistics/