Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Thyroid/c3/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Thyroid for cell cluster c3 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Thyroid_c3_mean_counts_contribs | float |
liu2026Multiomics_Thyroid_c3_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0293, 0.0733] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 92928386 | 2.90% | 92007316 |
| chr1 | 8902741 | 3.58% | 8814139 |
| chr2 | 7259150 | 3.00% | 7186791 |
| chr3 | 5994365 | 3.02% | 5933004 |
| chr4 | 4209831 | 2.21% | 4165477 |
| chr5 | 4706988 | 2.59% | 4659262 |
| chr6 | 5384190 | 3.15% | 5330131 |
| chr7 | 4625984 | 2.90% | 4580238 |
| chr8 | 3958975 | 2.73% | 3919316 |
| chr9 | 4278809 | 3.09% | 4236686 |
| chr10 | 4458399 | 3.33% | 4413588 |
| chr11 | 5008819 | 3.71% | 4959949 |
| chr12 | 4564578 | 3.42% | 4519544 |
| chr13 | 2151874 | 1.88% | 2129736 |
| chr14 | 3000511 | 2.80% | 2970446 |
| chr15 | 3118887 | 3.06% | 3087521 |
| chr16 | 3240634 | 3.59% | 3210802 |
| chr17 | 4432610 | 5.32% | 4391476 |
| chr18 | 1910067 | 2.38% | 1889644 |
| chr19 | 4043505 | 6.90% | 4008168 |
| chr20 | 2454214 | 3.81% | 2430773 |
| chr21 | 1035660 | 2.22% | 1024866 |
| chr22 | 1939226 | 3.82% | 1921296 |
| chrX | 2214590 | 1.42% | 2193091 |
| chrY | 33779 | 0.06% | 31372 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 92007316 | 1 | 2114 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Thyroid_c3__mean_counts_contribs.bw | 570.31 MB | e6187c5a09437e8ca0c604de455b907b |
| genomic_resource.yaml | 1.32 KB | 0e19b1b6b5a6379febe10a0966a2e766 |
| statistics/ |
