Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Thyroid/c3/mean_counts_contribscontent_copy
Type position_score
Version 0
Summary mean_counts_contribs for Thyroid for cell cluster c3
Description
Labels
  • assay: SHARE-seq
  • cluster: Thyroid_c3
  • data_types: atac_contribution
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Thyroid
  • processing_level: contribution_scores
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Thyroid_c3_mean_counts_contribs float

liu2026Multiomics_Thyroid_c3_mean_counts_contribs

base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
HISTOGRAM FOR liu2026Multiomics_Thyroid_c3_mean_counts_contribs [-0.0293, 0.0733]
n
92,928,386
mean
6.77e-06
sd
0.00267

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 929283862.90% 92007316
chr1 8902741 3.58% 8814139
chr2 7259150 3.00% 7186791
chr3 5994365 3.02% 5933004
chr4 4209831 2.21% 4165477
chr5 4706988 2.59% 4659262
chr6 5384190 3.15% 5330131
chr7 4625984 2.90% 4580238
chr8 3958975 2.73% 3919316
chr9 4278809 3.09% 4236686
chr10 4458399 3.33% 4413588
chr11 5008819 3.71% 4959949
chr12 4564578 3.42% 4519544
chr13 2151874 1.88% 2129736
chr14 3000511 2.80% 2970446
chr15 3118887 3.06% 3087521
chr16 3240634 3.59% 3210802
chr17 4432610 5.32% 4391476
chr18 1910067 2.38% 1889644
chr19 4043505 6.90% 4008168
chr20 2454214 3.81% 2430773
chr21 1035660 2.22% 1024866
chr22 1939226 3.82% 1921296
chrX 2214590 1.42% 2193091
chrY 33779 0.06% 31372
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 92007316 1 2114 1.01 1
global segment-length histogram

Files

Filename Size md5
Thyroid_c3__mean_counts_contribs.bw 570.31 MB e6187c5a09437e8ca0c604de455b907b
genomic_resource.yaml 1.32 KB 0e19b1b6b5a6379febe10a0966a2e766
statistics/