Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Thyroid/c4/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Thyroid for cell cluster c4 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Thyroid_c4_mean_counts_contribs | float |
liu2026Multiomics_Thyroid_c4_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0285, 0.0751] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 87193477 | 2.72% | 86370322 |
| chr1 | 8322774 | 3.34% | 8243367 |
| chr2 | 6816044 | 2.81% | 6751064 |
| chr3 | 5492037 | 2.77% | 5439033 |
| chr4 | 4051168 | 2.13% | 4009679 |
| chr5 | 4831151 | 2.66% | 4785102 |
| chr6 | 5407175 | 3.17% | 5356003 |
| chr7 | 4440356 | 2.79% | 4398374 |
| chr8 | 3987269 | 2.75% | 3949555 |
| chr9 | 3880178 | 2.80% | 3844220 |
| chr10 | 4156751 | 3.11% | 4117281 |
| chr11 | 4498327 | 3.33% | 4457129 |
| chr12 | 4262315 | 3.20% | 4222546 |
| chr13 | 2156145 | 1.89% | 2134615 |
| chr14 | 2783199 | 2.60% | 2757394 |
| chr15 | 2749488 | 2.70% | 2723289 |
| chr16 | 2851114 | 3.16% | 2825989 |
| chr17 | 3905984 | 4.69% | 3872065 |
| chr18 | 1727187 | 2.15% | 1709181 |
| chr19 | 3750237 | 6.40% | 3719040 |
| chr20 | 2212534 | 3.43% | 2192415 |
| chr21 | 1037669 | 2.22% | 1026971 |
| chr22 | 1607358 | 3.16% | 1592949 |
| chrX | 2236175 | 1.43% | 2215172 |
| chrY | 30842 | 0.05% | 27889 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 86370322 | 1 | 2711 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Thyroid_c4__mean_counts_contribs.bw | 535.49 MB | b5e70fcdb4d4db91fb3e99a130e65e48 |
| genomic_resource.yaml | 1.32 KB | 4b8f66c9ab1fc0a167c84f2c86466d3f |
| statistics/ |
