Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Thyroid/c4/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Thyroid for cell cluster c4
Description
Labels
  • assay: SHARE-seq
  • cluster: Thyroid_c4
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Thyroid
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Thyroid_c4_mean_pred_corrected float

liu2026Multiomics_Thyroid_c4_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Thyroid_c4_mean_pred_corrected [0.000324, 3.19]
n
44,090,081
mean
0.043
sd
0.068

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 440900811.37% 44088519
chr1 4212732 1.69% 4212727
chr2 3438490 1.42% 3438489
chr3 2764509 1.39% 2764508
chr4 2036093 1.07% 2036092
chr5 2431995 1.34% 2431994
chr6 2747750 1.61% 2747750
chr7 2235221 1.40% 2235220
chr8 2004816 1.38% 2004815
chr9 1958519 1.42% 1958518
chr10 2098169 1.57% 2098169
chr11 2283892 1.69% 2283892
chr12 2158518 1.62% 2158517
chr13 1084417 0.95% 1084416
chr14 1413822 1.32% 1413822
chr15 1387085 1.36% 1387085
chr16 1440696 1.59% 1440696
chr17 1992083 2.39% 1992082
chr18 868840 1.08% 868840
chr19 1941041 3.31% 1941041
chr20 1113967 1.73% 1113966
chr21 523952 1.12% 523952
chr22 805152 1.58% 805152
chrX 1132421 0.73% 1132421
chrY 15901 0.03% 14355
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 44088519 1 1507 1 1
global segment-length histogram

Files

Filename Size md5
Thyroid_c4__mean_pred_corrected.bw 334.59 MB caea81fad618fc97162865faf037c1c7
genomic_resource.yaml 1.28 KB 8c371f275841a385070bb0759ba01c59
statistics/