Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Thyroid/c5/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Thyroid for cell cluster c5 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Thyroid_c5_mean_counts_contribs | float |
liu2026Multiomics_Thyroid_c5_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0321, 0.0843] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 82425722 | 2.57% | 81657071 |
| chr1 | 8241781 | 3.31% | 8164361 |
| chr2 | 6384422 | 2.64% | 6325428 |
| chr3 | 5371761 | 2.71% | 5320297 |
| chr4 | 3597674 | 1.89% | 3561147 |
| chr5 | 4048855 | 2.23% | 4011070 |
| chr6 | 4722622 | 2.76% | 4677899 |
| chr7 | 4133654 | 2.59% | 4095067 |
| chr8 | 3449318 | 2.38% | 3417143 |
| chr9 | 3623432 | 2.62% | 3590236 |
| chr10 | 3928436 | 2.94% | 3891421 |
| chr11 | 4462257 | 3.30% | 4421811 |
| chr12 | 3917531 | 2.94% | 3881861 |
| chr13 | 1799620 | 1.57% | 1781745 |
| chr14 | 2559987 | 2.39% | 2536506 |
| chr15 | 2650914 | 2.60% | 2626903 |
| chr16 | 2903619 | 3.21% | 2878342 |
| chr17 | 4142385 | 4.98% | 4104591 |
| chr18 | 1587174 | 1.97% | 1570510 |
| chr19 | 3917092 | 6.68% | 3883954 |
| chr20 | 2169459 | 3.37% | 2150021 |
| chr21 | 916944 | 1.96% | 908220 |
| chr22 | 1822118 | 3.59% | 1806179 |
| chrX | 2065750 | 1.32% | 2046071 |
| chrY | 8917 | 0.02% | 6288 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 81657071 | 1 | 2575 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Thyroid_c5__mean_counts_contribs.bw | 505.72 MB | 1c2b9f47c272b819799cbdb45c642d28 |
| genomic_resource.yaml | 1.32 KB | a89b99facff3ede75a213110ef3515b3 |
| statistics/ |
