Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Thyroid/c5/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Thyroid for cell cluster c5
Description
Labels
  • assay: SHARE-seq
  • cluster: Thyroid_c5
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Thyroid
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Thyroid_c5_mean_pred_corrected float

liu2026Multiomics_Thyroid_c5_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Thyroid_c5_mean_pred_corrected [0.000704, 4.03]
n
42,042,822
mean
0.041
sd
0.0638

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 420428221.31% 42041416
chr1 4209354 1.69% 4209351
chr2 3257177 1.34% 3257173
chr3 2736021 1.38% 2736020
chr4 1832651 0.96% 1832651
chr5 2056982 1.13% 2056981
chr6 2424041 1.42% 2424040
chr7 2096577 1.32% 2096576
chr8 1758017 1.21% 1758017
chr9 1840794 1.33% 1840794
chr10 1996541 1.49% 1996541
chr11 2270174 1.68% 2270173
chr12 2003439 1.50% 2003439
chr13 914786 0.80% 914786
chr14 1310087 1.22% 1310087
chr15 1350040 1.32% 1350040
chr16 1478694 1.64% 1478693
chr17 2128275 2.56% 2128275
chr18 804427 1.00% 804427
chr19 2027062 3.46% 2027061
chr20 1099768 1.71% 1099768
chr21 467681 1.00% 467681
chr22 924408 1.82% 924408
chrX 1051365 0.67% 1051364
chrY 4461 0.01% 3070
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 42041416 1 1372 1 1
global segment-length histogram

Files

Filename Size md5
Thyroid_c5__mean_pred_corrected.bw 319.38 MB 2bafc5e39ae2052b4bc759d85f6b41c7
genomic_resource.yaml 1.28 KB fdf285f8eb95a9115b39c56a821d8c28
statistics/