Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Thyroid/c6/mean_counts_contribscontent_copy
Type position_score
Version 0
Summary mean_counts_contribs for Thyroid for cell cluster c6
Description
Labels
  • assay: SHARE-seq
  • cluster: Thyroid_c6
  • data_types: atac_contribution
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Thyroid
  • processing_level: contribution_scores
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Thyroid_c6_mean_counts_contribs float

liu2026Multiomics_Thyroid_c6_mean_counts_contribs

base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
HISTOGRAM FOR liu2026Multiomics_Thyroid_c6_mean_counts_contribs [-0.0251, 0.0635]
n
68,733,186
mean
-6.54e-06
sd
0.00231

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 687331862.14% 68102430
chr1 6737207 2.71% 6674471
chr2 5334880 2.20% 5285325
chr3 4248997 2.14% 4209217
chr4 2978156 1.57% 2949798
chr5 3518126 1.94% 3485149
chr6 4043799 2.37% 4006142
chr7 3340641 2.10% 3309714
chr8 2869729 1.98% 2843260
chr9 3112254 2.25% 3083777
chr10 3192992 2.39% 3163565
chr11 3710369 2.75% 3676575
chr12 3332659 2.50% 3301862
chr13 1449478 1.27% 1435683
chr14 2190775 2.05% 2170717
chr15 2273982 2.23% 2253399
chr16 2615926 2.90% 2593059
chr17 3424796 4.11% 3394941
chr18 1342587 1.67% 1329128
chr19 3311153 5.65% 3283508
chr20 1870029 2.90% 1853137
chr21 720452 1.54% 713859
chr22 1472195 2.90% 1459034
chrX 1622002 1.04% 1607260
chrY 20002 0.03% 19850
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 68102430 1 964 1.01 1
global segment-length histogram

Files

Filename Size md5
Thyroid_c6__mean_counts_contribs.bw 422.08 MB 0f67fb7f30306f0287f94b6cb2095cc9
genomic_resource.yaml 1.32 KB e42b1d36e464b320179658fb5e58d8ed
statistics/