Resource
| Id | summary/liu2026Multiomics/pseudobulk_accessibility/Thyroid/c6/mean_counts_contribs |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | mean_counts_contribs for Thyroid for cell cluster c6 |
| Description |
Downloaded from: https://zenodo.org/records/15066651. Description of the data and download instructions can be found https://github.com/GreenleafLab/HDMA/blob/main/DATA.md |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| liu2026Multiomics_Thyroid_c6_mean_counts_contribs | float |
liu2026Multiomics_Thyroid_c6_mean_counts_contribs |
base-resolution contribution scores for the counts head of ChromBPNet as computed by DeepLIFT
|
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[-0.0251, 0.0635] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 68733186 | 2.14% | 68102430 |
| chr1 | 6737207 | 2.71% | 6674471 |
| chr2 | 5334880 | 2.20% | 5285325 |
| chr3 | 4248997 | 2.14% | 4209217 |
| chr4 | 2978156 | 1.57% | 2949798 |
| chr5 | 3518126 | 1.94% | 3485149 |
| chr6 | 4043799 | 2.37% | 4006142 |
| chr7 | 3340641 | 2.10% | 3309714 |
| chr8 | 2869729 | 1.98% | 2843260 |
| chr9 | 3112254 | 2.25% | 3083777 |
| chr10 | 3192992 | 2.39% | 3163565 |
| chr11 | 3710369 | 2.75% | 3676575 |
| chr12 | 3332659 | 2.50% | 3301862 |
| chr13 | 1449478 | 1.27% | 1435683 |
| chr14 | 2190775 | 2.05% | 2170717 |
| chr15 | 2273982 | 2.23% | 2253399 |
| chr16 | 2615926 | 2.90% | 2593059 |
| chr17 | 3424796 | 4.11% | 3394941 |
| chr18 | 1342587 | 1.67% | 1329128 |
| chr19 | 3311153 | 5.65% | 3283508 |
| chr20 | 1870029 | 2.90% | 1853137 |
| chr21 | 720452 | 1.54% | 713859 |
| chr22 | 1472195 | 2.90% | 1459034 |
| chrX | 1622002 | 1.04% | 1607260 |
| chrY | 20002 | 0.03% | 19850 |
| 431 contigs with no values (121016273 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 68102430 | 1 | 964 | 1.01 | 1 |
Files
| Filename | Size | md5 |
|---|---|---|
| Thyroid_c6__mean_counts_contribs.bw | 422.08 MB | 0f67fb7f30306f0287f94b6cb2095cc9 |
| genomic_resource.yaml | 1.32 KB | e42b1d36e464b320179658fb5e58d8ed |
| statistics/ |
