Resource

Id summary/liu2026Multiomics/pseudobulk_accessibility/Thyroid/c6/mean_pred_correctedcontent_copy
Type position_score
Version 0
Summary mean_pred_corrected for Thyroid for cell cluster c6
Description
Labels
  • assay: SHARE-seq
  • cluster: Thyroid_c6
  • data_types: atac_signal
  • dataset: liu2026Multiomics
  • modalities: ATAC
  • organ: Thyroid
  • processing_level: phred_normalized
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: human
  • vendor: unknown

Scores (1)

ID Type Default annotation Description Histogram Range Summary
liu2026Multiomics_Thyroid_c6_mean_pred_corrected float

liu2026Multiomics_Thyroid_c6_mean_pred_corrected

bias-corrected accessibility predicted by ChromBPNet
HISTOGRAM FOR liu2026Multiomics_Thyroid_c6_mean_pred_corrected [5.44e-05, 2.32]
n
34,358,078
mean
0.0317
sd
0.0466

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 343580781.07% 34358070
chr1 3378082 1.36% 3378079
chr2 2662658 1.10% 2662658
chr3 2121044 1.07% 2121043
chr4 1491122 0.78% 1491122
chr5 1756268 0.97% 1756267
chr6 2029248 1.19% 2029247
chr7 1664093 1.04% 1664093
chr8 1431052 0.99% 1431052
chr9 1548499 1.12% 1548498
chr10 1591927 1.19% 1591927
chr11 1847566 1.37% 1847565
chr12 1668602 1.25% 1668602
chr13 722913 0.63% 722913
chr14 1096604 1.02% 1096604
chr15 1129807 1.11% 1129807
chr16 1301906 1.44% 1301906
chr17 1721887 2.07% 1721887
chr18 665219 0.83% 665219
chr19 1687684 2.88% 1687684
chr20 933042 1.45% 933042
chr21 358390 0.77% 358390
chr22 728162 1.43% 728162
chrX 812327 0.52% 812327
chrY 9976 0.02% 9976
431 contigs with no values (121016273 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 34358070 1 2 1 1
global segment-length histogram

Files

Filename Size md5
Thyroid_c6__mean_pred_corrected.bw 261.06 MB c7696d5f5feb3cf05a4451d055900bcf
genomic_resource.yaml 1.28 KB 7ffeef6cc46d0c21123bf5a3780e6628
statistics/