Resource

Id summary/zemke2023Conserved/pseudobulk_atac/macaque_m1/L6_CTcontent_copy
Type position_score
Version 0
Summary Pseudo-bulk atac track in macaque_m1 for L6_CT cell type
Description
Labels
  • assay: 10x_Multiome
  • brain_region: m1
  • cell_type: L6_CT
  • data_types: atac_signal
  • dataset: zemke2023Conserved
  • modalities: ATAC
  • processing_level: RPKM_normalized
  • reference_genome: reference/Macaque/genome/rheMac10
  • resolution: pseudo_bulk_cell_type
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (1)

ID Type Default annotation Description Histogram Range Summary
zemke2023Conserved_macaque_m1_L6_CT_atac_rpkm float

zemke2023Conserved_macaque_m1_L6_CT_atac_rpkm
Pseudo-bulk RPKM atac in macaque_m1 for L6_CT cell type
 HISTOGRAM FOR zemke2023Conserved_macaque_m1_L6_CT_atac_rpkm [0, 5.05e+04]
n
2,971,331,530
mean
3.21
sd
13.8

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 2971331530 122199482
chr1 223616942 100.00% 10362980
chr2 196197964 100.00% 7967286
chr3 185288947 100.00% 7850861
chr4 169963040 100.00% 6872323
chr5 187317192 100.00% 6643579
chr6 179085566 100.00% 7200881
chr7 169868564 100.00% 7599011
chr8 145679320 100.00% 5952764
chr9 134124166 100.00% 5849987
chr10 99517758 100.00% 5016713
chr11 133066086 100.00% 5868596
chr12 130043856 100.00% 5323659
chr13 108737130 100.00% 4775097
chr14 128056306 100.00% 5774852
chr15 113283604 100.00% 4935765
chr16 79627064 100.00% 4278899
chr17 95433459 100.00% 3608628
chr18 74474043 100.00% 2962879
chr19 58315233 100.00% 3106772
chr20 77137495 100.00% 3887709
chrM 16564 100.00% 1609
chrX 153388924 100.00% 3729171
chrY 11753682 100.00% 241285
ML143117.1 738392 17600
ML143118.1 669983 11562
ML143119.1 862827 18460
ML143120.1 823856 11300
ML143121.1 1005795 15190
ML143122.1 733739 12472
ML143123.1 539197 23446
ML143124.1 1117261 22519
QNVO02000039.1 29490 845
QNVO02000040.1 29551 1347
QNVO02000041.1 31521 1134
QNVO02000042.1 35220 2346
QNVO02000043.1 43762 1904
QNVO02000044.1 43668 930
QNVO02000045.1 45264 598
QNVO02000046.1 74751 2266
QNVO02000047.1 75692 3965
QNVO02000048.1 64301 1150
QNVO02000049.1 84426 3738
QNVO02000050.1 88635 5721
QNVO02000051.1 115549 5030
QNVO02000052.1 31739 1658
QNVO02000061.1 28076 1941
QNVO02000062.1 30974 766
QNVO02000063.1 34094 1226
QNVO02000064.1 35836 488
QNVO02000065.1 36993 851
QNVO02000066.1 42603 751
QNVO02000067.1 44793 1723
QNVO02000068.1 36901 1425
QNVO02000069.1 52625 1664
QNVO02000070.1 65186 1157
QNVO02000071.1 70089 1909
QNVO02000072.1 75026 2121
QNVO02000073.1 86584 3629
QNVO02000074.1 67726 1933
QNVO02000082.1 30461 886
QNVO02000083.1 34828 1657
QNVO02000084.1 34758 497
QNVO02000085.1 34993 1497
QNVO02000086.1 40200 2211
QNVO02000087.1 35195 545
QNVO02000088.1 39160 1837
QNVO02000096.1 53508 1998
QNVO02000097.1 44853 1282
QNVO02000098.1 55639 1874
QNVO02000099.1 65990 4369
QNVO02000100.1 57542 1178
QNVO02000101.1 89870 2061
QNVO02000102.1 123715 8416
QNVO02000113.1 32550 417
QNVO02000114.1 34793 869
QNVO02000115.1 44605 2394
QNVO02000116.1 36893 620
QNVO02000117.1 37575 943
QNVO02000118.1 37831 1518
QNVO02000119.1 37661 1549
QNVO02000120.1 44420 762
QNVO02000121.1 45281 491
QNVO02000122.1 46256 867
QNVO02000123.1 52830 2729
QNVO02000124.1 79630 4068
QNVO02000125.1 82543 1763
QNVO02000126.1 51233 1374
QNVO02000127.1 56227 2865
QNVO02000128.1 27245 1300
QNVO02000129.1 29900 493
QNVO02000130.1 62273 3487
QNVO02000141.1 35411 631
QNVO02000142.1 36170 798
QNVO02000143.1 38712 541
QNVO02000144.1 39777 454
QNVO02000145.1 40306 1176
QNVO02000146.1 39466 2181
QNVO02000147.1 52687 2802
QNVO02000148.1 53925 1929
QNVO02000149.1 53926 1839
QNVO02000150.1 58262 2845
QNVO02000151.1 78748 4844
QNVO02000152.1 88419 4156
QNVO02000153.1 94627 4014
QNVO02000154.1 27791 1719
QNVO02000166.1 28177 264
QNVO02000167.1 33884 99
QNVO02000168.1 34745 549
QNVO02000169.1 50438 1223
QNVO02000170.1 43437 2717
QNVO02000171.1 52552 2803
QNVO02000172.1 54058 266
QNVO02000173.1 54071 237
QNVO02000174.1 54349 1235
QNVO02000175.1 63611 3731
QNVO02000176.1 65150 2339
QNVO02000177.1 65140 2627
QNVO02000178.1 65979 4044
QNVO02000179.1 63325 3844
QNVO02000180.1 53701 2443
QNVO02000181.1 27229 246
QNVO02000194.1 25947 334
QNVO02000195.1 181889 4224
QNVO02000196.1 31091 35
QNVO02000197.1 31166 41
QNVO02000198.1 31184 79
QNVO02000199.1 31250 187
QNVO02000200.1 43610 535
QNVO02000201.1 37523 455
QNVO02000202.1 38541 337
QNVO02000203.1 45093 369
QNVO02000204.1 46306 1227
QNVO02000205.1 46347 2584
QNVO02000206.1 50375 765
QNVO02000207.1 59026 756
QNVO02000208.1 61686 1909
QNVO02000209.1 61907 1143
QNVO02000210.1 165269 5076
QNVO02000211.1 27125 772
QNVO02000212.1 15354 214
QNVO02000216.1 32300 445
QNVO02000217.1 37145 1163
QNVO02000218.1 37664 886
QNVO02000219.1 41176 1445
QNVO02000220.1 41974 1618
QNVO02000221.1 55554 2313
QNVO02000222.1 76316 2644
QNVO02000237.1 30450 948
QNVO02000238.1 39455 2387
QNVO02000239.1 41056 2067
QNVO02000240.1 44182 1616
QNVO02000241.1 47076 1260
QNVO02000242.1 53667 2319
QNVO02000243.1 60928 3156
QNVO02000244.1 61817 3110
QNVO02000245.1 66433 2919
QNVO02000246.1 71257 2878
QNVO02000247.1 76390 4581
QNVO02000248.1 78939 1852
QNVO02000249.1 81779 1443
QNVO02000250.1 89493 4747
QNVO02000251.1 90411 2972
QNVO02000252.1 134439 7242
QNVO02000253.1 58152 3539
QNVO02000254.1 124323 4516
QNVO02000255.1 183828 5704
QNVO02000259.1 26680 1095
QNVO02000260.1 32580 982
QNVO02000261.1 33548 2026
QNVO02000262.1 37051 1165
QNVO02000263.1 39993 1355
QNVO02000264.1 40438 979
QNVO02000265.1 43990 605
QNVO02000266.1 48895 2214
QNVO02000267.1 50188 1130
QNVO02000268.1 51363 2288
QNVO02000269.1 35879 1317
QNVO02000270.1 54860 2429
QNVO02000271.1 55541 2823
QNVO02000272.1 55582 1118
QNVO02000273.1 59940 615
QNVO02000274.1 82305 3041
QNVO02000275.1 118135 6641
QNVO02000276.1 133025 4361
QNVO02000277.1 52076 1082
QNVO02000278.1 116334 7182
QNVO02000279.1 65914 3146
QNVO02000293.1 26276 739
QNVO02000294.1 34752 1000
QNVO02000295.1 36919 1578
QNVO02000296.1 64383 2613
QNVO02000297.1 30586 879
QNVO02000298.1 35391 699
QNVO02000299.1 40656 1897
QNVO02000300.1 51074 2386
QNVO02000301.1 48342 887
QNVO02000302.1 52951 783
QNVO02000303.1 86201 2132
QNVO02000304.1 92040 3711
QNVO02000305.1 52934 1856
QNVO02000306.1 54780 1649
QNVO02000315.1 25300 179
QNVO02000316.1 29349 413
QNVO02000317.1 29445 130
QNVO02000318.1 29713 253
QNVO02000319.1 36488 1481
QNVO02000320.1 29788 576
QNVO02000321.1 42544 2090
QNVO02000322.1 43837 884
QNVO02000323.1 51062 2628
QNVO02000324.1 54307 1573
QNVO02000325.1 54760 1201
QNVO02000326.1 59741 2824
QNVO02000327.1 70296 1871
QNVO02000328.1 72641 333
QNVO02000329.1 94715 3553
QNVO02000330.1 130268 5212
QNVO02000331.1 134158 4838
QNVO02000332.1 47814 2472
QNVO02000333.1 30503 604
QNVO02000334.1 1229889 15449
QNVO02000347.1 26875 552
QNVO02000348.1 27011 1082
QNVO02000349.1 30037 874
QNVO02000350.1 34319 1694
QNVO02000351.1 36085 256
QNVO02000352.1 37498 985
QNVO02000353.1 45706 1152
QNVO02000354.1 47138 1547
QNVO02000355.1 52252 1664
QNVO02000356.1 54371 988
QNVO02000357.1 54530 1938
QNVO02000358.1 54679 1418
QNVO02000359.1 60005 1427
QNVO02000360.1 75365 3450
QNVO02000361.1 85793 2404
QNVO02000362.1 90302 2359
QNVO02000371.1 26685 210
QNVO02000372.1 29791 272
QNVO02000373.1 32640 306
QNVO02000374.1 34222 521
QNVO02000375.1 35517 1794
QNVO02000376.1 37838 835
QNVO02000377.1 41651 606
QNVO02000378.1 41841 1231
QNVO02000379.1 36351 664
QNVO02000380.1 48938 655
QNVO02000381.1 56442 1307
QNVO02000382.1 68769 1552
QNVO02000383.1 103593 1921
QNVO02000384.1 185143 6700
QNVO02000385.1 39093 730
QNVO02000393.1 27603 1065
QNVO02000394.1 28241 617
QNVO02000395.1 38876 909
QNVO02000396.1 39393 566
QNVO02000397.1 47332 767
QNVO02000398.1 58084 4210
QNVO02000399.1 57998 1586
QNVO02000400.1 61300 1981
QNVO02000401.1 62126 2228
QNVO02000402.1 64491 3653
QNVO02000403.1 76406 1849
QNVO02000404.1 82950 3517
QNVO02000405.1 101334 2891
QNVO02000406.1 35732 1279
QNVO02000424.1 27859 1833
QNVO02000425.1 28798 1972
QNVO02000426.1 31162 541
QNVO02000427.1 35826 518
QNVO02000428.1 41366 2338
QNVO02000429.1 46105 2811
QNVO02000430.1 51812 2780
QNVO02000431.1 53832 3029
QNVO02000432.1 55920 1075
QNVO02000433.1 58999 1481
QNVO02000434.1 61446 2611
QNVO02000435.1 65479 1909
QNVO02000436.1 72206 3380
QNVO02000437.1 72836 3190
QNVO02000438.1 73247 1883
QNVO02000439.1 83758 4831
QNVO02000440.1 98820 3839
QNVO02000441.1 31768 518
QNVO02000458.1 32194 552
QNVO02000459.1 133312 6000
QNVO02000460.1 35273 954
QNVO02000461.1 35782 484
QNVO02000462.1 36168 749
QNVO02000463.1 38408 970
QNVO02000464.1 28604 909
QNVO02000465.1 45844 812
QNVO02000466.1 54299 895
QNVO02000467.1 59871 3368
QNVO02000468.1 66719 4310
QNVO02000469.1 70864 1380
QNVO02000470.1 76376 2797
QNVO02000471.1 83314 4671
QNVO02000472.1 29721 1776
QNVO02000473.1 53832 2152
QNVO02000504.1 36031 2026
QNVO02000505.1 39733 1198
QNVO02000506.1 47833 2084
QNVO02000507.1 47980 1283
QNVO02000508.1 52082 1110
QNVO02000509.1 54497 2107
QNVO02000510.1 56716 1850
QNVO02000511.1 64642 3565
QNVO02000512.1 65546 4132
QNVO02000513.1 66711 1658
QNVO02000514.1 77799 2891
QNVO02000515.1 85724 2589
QNVO02000516.1 104447 4506
QNVO02000517.1 29162 865
QNVO02000518.1 47554 1404
QNVO02000519.1 16018 292
QNVO02000520.1 16072 80
QNVO02000521.1 15993 81
QNVO02000522.1 16197 101
QNVO02000523.1 16074 70
QNVO02000524.1 16042 217
QNVO02000525.1 16077 172
QNVO02000526.1 15853 254
QNVO02000527.1 15981 550
QNVO02000528.1 16244 67
QNVO02000529.1 32289 501
QNVO02000530.1 16160 109
QNVO02000531.1 16187 5
QNVO02000532.1 16363 64
QNVO02000533.1 16120 230
QNVO02000534.1 16055 116
QNVO02000535.1 16274 291
QNVO02000536.1 16364 30
QNVO02000537.1 16225 384
QNVO02000538.1 16356 235
QNVO02000539.1 16255 410
QNVO02000540.1 27321 900
QNVO02000541.1 16236 831
QNVO02000542.1 16356 263
QNVO02000543.1 16461 84
QNVO02000544.1 16455 1043
QNVO02000545.1 16383 119
QNVO02000546.1 16352 642
QNVO02000547.1 15013 680
QNVO02000548.1 16280 429
QNVO02000549.1 16551 91
QNVO02000550.1 16444 62
QNVO02000551.1 56609 1770
QNVO02000552.1 16439 136
QNVO02000553.1 16412 451
QNVO02000554.1 16632 225
QNVO02000555.1 16299 66
QNVO02000556.1 16406 358
QNVO02000557.1 16596 75
QNVO02000558.1 16436 95
QNVO02000559.1 16779 1
QNVO02000560.1 16773 65
QNVO02000561.1 13224 146
QNVO02000562.1 14311 253
QNVO02000563.1 16475 268
QNVO02000564.1 16734 65
QNVO02000565.1 15042 695
QNVO02000566.1 16653 482
QNVO02000567.1 16729 121
QNVO02000568.1 16730 99
QNVO02000569.1 16370 65
QNVO02000570.1 16749 170
QNVO02000571.1 16651 188
QNVO02000572.1 16692 415
QNVO02000573.1 24869 336
QNVO02000574.1 16634 133
QNVO02000575.1 16844 444
QNVO02000576.1 16892 175
QNVO02000577.1 16406 204
QNVO02000578.1 16960 118
QNVO02000579.1 16925 92
QNVO02000580.1 16946 56
QNVO02000581.1 17035 76
QNVO02000582.1 16874 250
QNVO02000583.1 16960 119
QNVO02000584.1 15132 234
QNVO02000585.1 17048 111
QNVO02000586.1 16930 538
QNVO02000587.1 16900 656
QNVO02000588.1 16782 544
QNVO02000589.1 16399 356
QNVO02000590.1 17005 999
QNVO02000591.1 16760 1
QNVO02000592.1 16880 76
QNVO02000593.1 16975 315
QNVO02000594.1 13066 397
QNVO02000595.1 17407 702
QNVO02000596.1 17041 178
QNVO02000597.1 17431 67
QNVO02000598.1 17069 171
QNVO02000599.1 17372 77
QNVO02000600.1 25112 931
QNVO02000601.1 16450 425
QNVO02000602.1 16857 321
QNVO02000603.1 17184 277
QNVO02000604.1 17258 98
QNVO02000605.1 17214 393
QNVO02000606.1 14066 86
QNVO02000607.1 17331 38
QNVO02000608.1 17274 195
QNVO02000609.1 17243 1071
QNVO02000610.1 17185 143
QNVO02000611.1 16695 259
QNVO02000612.1 17197 45
QNVO02000613.1 17342 79
QNVO02000614.1 17231 96
QNVO02000615.1 17498 74
QNVO02000616.1 17275 465
QNVO02000617.1 29983 655
QNVO02000618.1 17398 788
QNVO02000619.1 17418 156
QNVO02000620.1 17582 66
QNVO02000621.1 17409 176
QNVO02000622.1 17349 97
QNVO02000623.1 17478 172
QNVO02000624.1 17439 215
QNVO02000625.1 17634 77
QNVO02000626.1 17843 1
QNVO02000627.1 17802 1
QNVO02000628.1 31063 512
QNVO02000632.1 17707 78
QNVO02000633.1 9903 95
QNVO02000634.1 17583 404
QNVO02000635.1 17715 95
QNVO02000636.1 17761 161
QNVO02000637.1 17739 683
QNVO02000638.1 17822 113
QNVO02000639.1 17886 1
QNVO02000640.1 17447 72
QNVO02000641.1 17932 158
QNVO02000642.1 37152 300
QNVO02000643.1 17654 359
QNVO02000644.1 17964 137
QNVO02000645.1 17871 184
QNVO02000646.1 17895 164
QNVO02000647.1 18023 43
QNVO02000648.1 17833 285
QNVO02000649.1 17917 75
QNVO02000650.1 18018 678
QNVO02000651.1 17912 122
QNVO02000652.1 17825 757
QNVO02000653.1 45053 830
QNVO02000654.1 17844 96
QNVO02000655.1 25372 474
QNVO02000656.1 17956 437
QNVO02000657.1 18075 98
QNVO02000658.1 17870 444
QNVO02000659.1 18079 787
QNVO02000660.1 18166 110
QNVO02000661.1 18142 599
QNVO02000662.1 18128 1
QNVO02000663.1 18335 17
QNVO02000664.1 30841 83
QNVO02000665.1 18029 322
QNVO02000666.1 18339 115
QNVO02000667.1 18298 24
QNVO02000668.1 17970 92
QNVO02000669.1 4886 25
QNVO02000670.1 17870 113
QNVO02000671.1 18327 895
QNVO02000672.1 18353 84
QNVO02000673.1 18435 72
QNVO02000674.1 18512 164
QNVO02000675.1 21919 97
QNVO02000676.1 18498 95
QNVO02000677.1 18217 119
QNVO02000678.1 18414 140
QNVO02000679.1 18158 1483
QNVO02000680.1 18591 43
QNVO02000681.1 18512 130
QNVO02000682.1 18667 120
QNVO02000683.1 18610 1
QNVO02000684.1 18647 63
QNVO02000685.1 18566 1183
QNVO02000686.1 13685 379
QNVO02000687.1 17982 1
QNVO02000688.1 18464 260
QNVO02000689.1 18792 440
QNVO02000690.1 18592 70
QNVO02000691.1 18898 47
QNVO02000692.1 18723 17
QNVO02000693.1 18775 33
QNVO02000694.1 18888 54
QNVO02000695.1 18851 81
QNVO02000696.1 18781 90
QNVO02000697.1 17329 767
QNVO02000698.1 18779 245
QNVO02000699.1 18436 243
QNVO02000700.1 19001 64
QNVO02000701.1 19096 69
QNVO02000702.1 19092 78
QNVO02000703.1 19055 27
QNVO02000704.1 18522 227
QNVO02000705.1 19175 42
QNVO02000706.1 18878 400
QNVO02000707.1 18966 179
QNVO02000708.1 30668 288
QNVO02000709.1 19035 1625
QNVO02000710.1 18898 226
QNVO02000711.1 18602 530
QNVO02000712.1 19066 281
QNVO02000713.1 18466 674
QNVO02000714.1 19017 107
QNVO02000715.1 19182 133
QNVO02000716.1 19023 437
QNVO02000717.1 19094 1
QNVO02000718.1 19115 257
QNVO02000719.1 14050 139
QNVO02000720.1 19074 325
QNVO02000721.1 19199 65
QNVO02000722.1 19104 376
QNVO02000723.1 19229 337
QNVO02000724.1 19321 159
QNVO02000725.1 19224 102
QNVO02000726.1 18933 461
QNVO02000727.1 19468 46
QNVO02000728.1 19333 477
QNVO02000729.1 19521 43
QNVO02000730.1 23168 487
QNVO02000731.1 19531 90
QNVO02000732.1 18714 665
QNVO02000733.1 19321 277
QNVO02000734.1 19626 90
QNVO02000735.1 19589 90
QNVO02000736.1 19477 139
QNVO02000737.1 19413 73
QNVO02000738.1 19316 127
QNVO02000739.1 19921 1507
QNVO02000740.1 19279 922
QNVO02000741.1 26327 431
QNVO02000746.1 19622 23
QNVO02000747.1 19734 442
QNVO02000748.1 19629 369
QNVO02000749.1 19448 350
QNVO02000750.1 19615 62
QNVO02000751.1 19821 77
QNVO02000752.1 19395 47
QNVO02000753.1 19863 219
QNVO02000754.1 19786 146
QNVO02000755.1 19715 1223
QNVO02000756.1 45369 118
QNVO02000757.1 19805 5
QNVO02000758.1 20031 29
QNVO02000759.1 19816 63
QNVO02000760.1 19778 984
QNVO02000761.1 20070 35
QNVO02000762.1 19785 562
QNVO02000763.1 19783 349
QNVO02000764.1 19793 195
QNVO02000765.1 19837 47
QNVO02000766.1 18955 323
QNVO02000767.1 17118 110
QNVO02000768.1 19901 752
QNVO02000769.1 20090 75
QNVO02000770.1 20077 170
QNVO02000771.1 19990 506
QNVO02000772.1 19954 649
QNVO02000773.1 20187 9
QNVO02000774.1 20086 632
QNVO02000775.1 20106 59
QNVO02000776.1 20216 265
QNVO02000777.1 20150 406
QNVO02000778.1 31988 1293
QNVO02000779.1 20147 11
QNVO02000780.1 20246 224
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Segment lengths

segments min max mean median
segments 122199482 10 1004360 24.32 10
global segment-length histogram

Files

Filename Size md5
L6_CT_ATAC_RPKM.bw 642.32 MB de198cc2b4f7650166f451e57ed22a62
genomic_resource.yaml 1.22 KB e9701026a06d44edbaa224dd0e8d970e
statistics/