Resource
| Id | summary/zemke2023Conserved/pseudobulk_atac/mouse_mop/L6_IT_CAR3 |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | Pseudo-bulk atac track in mouse_mop for L6_IT_CAR3 cell type |
| Description | |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| zemke2023Conserved_mouse_mop_L6_IT_CAR3_atac_rpkm | float |
zemke2023Conserved_mouse_mop_L6_IT_CAR3_atac_rpkm |
Pseudo-bulk RPKM atac in mouse_mop for L6_IT_CAR3 cell type
|
 |
[0, 9.16e+04] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 2730871774 | 100.00% | 62815096 |
| chr1 | 195471971 | 100.00% | 4675242 |
| chr2 | 182113224 | 100.00% | 4790297 |
| chr3 | 160039680 | 100.00% | 3455567 |
| chr4 | 156508116 | 100.00% | 3883038 |
| chr5 | 151834684 | 100.00% | 3975528 |
| chr6 | 149736546 | 100.00% | 3650544 |
| chr7 | 145441459 | 100.00% | 3475643 |
| chr8 | 129401213 | 100.00% | 3273696 |
| chr9 | 124595110 | 100.00% | 3371122 |
| chr10 | 130694993 | 100.00% | 3173497 |
| chr11 | 122082543 | 100.00% | 3597774 |
| chr12 | 120129022 | 100.00% | 2822331 |
| chr13 | 120421639 | 100.00% | 2878113 |
| chr14 | 124902244 | 100.00% | 2861846 |
| chr15 | 104043685 | 100.00% | 2658305 |
| chr16 | 98207768 | 100.00% | 2301340 |
| chr17 | 94987271 | 100.00% | 2421602 |
| chr18 | 90702639 | 100.00% | 2157235 |
| chr19 | 61431566 | 100.00% | 1548057 |
| chrM | 16299 | 100.00% | 1527 |
| chrX | 171031299 | 100.00% | 1623343 |
| chrY | 91744698 | 100.00% | 159571 |
| GL456210.1 | 169725 | 100.00% | 2413 |
| GL456211.1 | 241735 | 100.00% | 4432 |
| GL456212.1 | 153618 | 100.00% | 2912 |
| GL456213.1 | 39340 | 100.00% | 1796 |
| GL456216.1 | 66673 | 100.00% | 1694 |
| GL456219.1 | 175968 | 100.00% | 556 |
| GL456221.1 | 206961 | 100.00% | 3325 |
| GL456233.1 | 336933 | 100.00% | 2422 |
| GL456239.1 | 40056 | 100.00% | 1334 |
| GL456350.1 | 227966 | 100.00% | 2638 |
| GL456354.1 | 195993 | 100.00% | 1057 |
| GL456359.1 | 22974 | 100.00% | 388 |
| GL456360.1 | 31704 | 100.00% | 525 |
| GL456366.1 | 47073 | 100.00% | 652 |
| GL456367.1 | 42057 | 100.00% | 181 |
| GL456368.1 | 20208 | 100.00% | 96 |
| GL456370.1 | 26764 | 100.00% | 501 |
| GL456372.1 | 28664 | 100.00% | 350 |
| GL456378.1 | 31602 | 100.00% | 428 |
| GL456379.1 | 72385 | 100.00% | 197 |
| GL456381.1 | 25871 | 100.00% | 587 |
| GL456382.1 | 23158 | 100.00% | 84 |
| GL456383.1 | 38659 | 100.00% | 661 |
| GL456385.1 | 35240 | 100.00% | 214 |
| GL456387.1 | 24685 | 100.00% | 898 |
| GL456389.1 | 28772 | 100.00% | 442 |
| GL456390.1 | 24668 | 100.00% | 536 |
| GL456392.1 | 23629 | 100.00% | 516 |
| GL456393.1 | 55711 | 100.00% | 1812 |
| GL456394.1 | 24323 | 100.00% | 321 |
| GL456396.1 | 21240 | 100.00% | 487 |
| JH584292.1 | 14945 | 100.00% | 132 |
| JH584293.1 | 207968 | 100.00% | 3393 |
| JH584294.1 | 191905 | 100.00% | 3580 |
| JH584295.1 | 1976 | 100.00% | 165 |
| JH584296.1 | 199368 | 100.00% | 907 |
| JH584297.1 | 205776 | 100.00% | 1087 |
| JH584298.1 | 184189 | 100.00% | 970 |
| JH584299.1 | 953012 | 100.00% | 4755 |
| JH584300.1 | 182347 | 100.00% | 439 |
| JH584301.1 | 259875 | 100.00% | 441 |
| JH584302.1 | 155838 | 100.00% | 310 |
| JH584303.1 | 158099 | 100.00% | 326 |
| JH584304.1 | 114452 | 100.00% | 8918 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 62815096 | 10 | 3100550 | 43.47 | 10 |
×
Files
| Filename | Size | md5 |
|---|---|---|
| L6_IT_CAR3_ATAC_RPKM.bw | 318.6 MB | b604eb68a77f0344b2d579e858fc00cf |
| genomic_resource.yaml | 1.25 KB | a496e9eaae9ed716a1dd485280329f3c |
| statistics/ |