Resource

Id	summary/zemke2023Conserved/pseudobulk_methylation/Human/L23/CGNcontent_copy
Type	position_score
Version	0
Summary	Pseudo-bulk wc track in Human M1 region for L23 cell type
Description
Labels	assay: snm3C-seq brain_region: m1 cell_type: L23 data_types: methylation_signal dataset: zemke2023Conserved measure: CGN modalities: DNA_methylation processing_level: processed reference_genome: reference/Human/genome/GRCh38.p13 resolution: pseudo_bulk_cell_type species: human vendor: UCSD Single-cell Epigenomics Platform

Scores (1)

ID	Type	Default annotation	Description	Histogram	Range	Summary
zemke2023Conserved_Human_L23_cgn_mc	float	zemke2023Conserved_Human_L23_cgn_mc			[0, 1]	n 938,464,069 mean 0.842 sd 0.257

n counts base pairs; sd is the population standard deviation.

Chromosome	Covered positions	Covered %	Segments
all chromosomes	938464069	28.72%	18496948
chr1	75480500	30.32%	1489704
chr2	75068600	31.00%	1482314
chr3	58584950	29.54%	1156997
chr4	52864250	27.79%	1043313
chr5	52531700	28.94%	1037024
chr6	50288600	29.44%	991718
chr7	52387100	32.88%	1030398
chr8	44236100	30.48%	872677
chr9	39557050	28.58%	779614
chr10	46109250	34.46%	909975
chr11	43678300	32.33%	862949
chr12	43742550	32.82%	863301
chr13	28550300	24.96%	563865
chr14	28203300	26.35%	557331
chr15	27037300	26.51%	532950
chr16	32576250	36.06%	642358
chr17	33437300	40.16%	658466
chr18	24922250	31.01%	489368
chr19	28281650	48.25%	559456
chr20	24286800	37.69%	479629
chr21	12532350	26.83%	247015
chr22	17025650	33.50%	336166
chrM	12019	72.54%	241
chrX	42421550	27.19%	819695
chrY	4648400	8.12%	90424
614 contigs with no values (178831587 bp)	0	0.00%	0

	segments	min	max	mean	median
segments	18496948	19	600	50.74	50