Resource

Id	summary/zemke2023Conserved/pseudobulk_methylation/Human/L4/CGNcontent_copy
Type	position_score
Version	0
Summary	Pseudo-bulk wc track in Human M1 region for L4 cell type
Description
Labels	assay: snm3C-seq brain_region: m1 cell_type: L4 data_types: methylation_signal dataset: zemke2023Conserved measure: CGN modalities: DNA_methylation processing_level: processed reference_genome: reference/Human/genome/GRCh38.p13 resolution: pseudo_bulk_cell_type species: human vendor: UCSD Single-cell Epigenomics Platform

Scores (1)

ID	Type	Default annotation	Description	Histogram	Range	Summary
zemke2023Conserved_Human_L4_cgn_mc	float	zemke2023Conserved_Human_L4_cgn_mc			[0, 1]	n 930,824,919 mean 0.857 sd 0.247

n counts base pairs; sd is the population standard deviation.

Chromosome	Covered positions	Covered %	Segments
all chromosomes	930824919	28.49%	17605329
chr1	75010500	30.13%	1420834
chr2	74722000	30.85%	1415484
chr3	58331250	29.42%	1107201
chr4	52531650	27.62%	996831
chr5	52184750	28.75%	991061
chr6	49959700	29.25%	944499
chr7	51856600	32.54%	980239
chr8	43886150	30.24%	831880
chr9	39202700	28.33%	741492
chr10	45841350	34.26%	868126
chr11	43385650	32.12%	824377
chr12	43471950	32.62%	825100
chr13	28397950	24.83%	538469
chr14	27994150	26.15%	531316
chr15	26762550	26.24%	506412
chr16	32229250	35.68%	611459
chr17	33001750	39.64%	622562
chr18	24405050	30.36%	461190
chr19	28046550	47.85%	534613
chr20	24089500	37.38%	456968
chr21	12327100	26.39%	234048
chr22	16815450	33.09%	318189
chrM	12019	72.54%	241
chrX	41916300	26.86%	759077
chrY	4443050	7.76%	83661
614 contigs with no values (178831587 bp)	0	0.00%	0

	segments	min	max	mean	median
segments	17605329	19	800	52.87	50