Resource

Id	summary/zemke2023Conserved/pseudobulk_methylation/Human/L5-ET/CGNcontent_copy
Type	position_score
Version	0
Summary	Pseudo-bulk wc track in Human M1 region for L5-ET cell type
Description
Labels	assay: snm3C-seq brain_region: m1 cell_type: L5-ET data_types: methylation_signal dataset: zemke2023Conserved measure: CGN modalities: DNA_methylation processing_level: processed reference_genome: reference/Human/genome/GRCh38.p13 resolution: pseudo_bulk_cell_type species: human vendor: UCSD Single-cell Epigenomics Platform

Scores (1)

ID	Type	Default annotation	Description	Histogram	Range	Summary
zemke2023Conserved_Human_L5-ET_cgn_mc	float	zemke2023Conserved_Human_L5-ET_cgn_mc			[0, 1]	n 755,388,119 mean 0.84 sd 0.32

n counts base pairs; sd is the population standard deviation.

Chromosome	Covered positions	Covered %	Segments
all chromosomes	755388119	23.12%	11028366
chr1	61475650	24.69%	892104
chr2	61827000	25.53%	913262
chr3	48306800	24.36%	726383
chr4	42747600	22.47%	646470
chr5	42397650	23.35%	637108
chr6	40668450	23.81%	602665
chr7	42052350	26.39%	612406
chr8	36299250	25.01%	537620
chr9	32093200	23.19%	461786
chr10	37954000	28.37%	547406
chr11	36074750	26.70%	527436
chr12	35267200	26.46%	515849
chr13	23423150	20.48%	349950
chr14	23235050	21.71%	339798
chr15	21901500	21.47%	318687
chr16	26731850	29.59%	370968
chr17	27141350	32.60%	370474
chr18	19252800	23.95%	284489
chr19	23732250	40.49%	313842
chr20	20194650	31.34%	286084
chr21	10065750	21.55%	144840
chr22	13896650	27.35%	185512
chrM	12019	72.54%	228
chrX	25982700	16.65%	398479
chrY	2654500	4.64%	44520
614 contigs with no values (178831587 bp)	0	0.00%	0

	segments	min	max	mean	median
segments	11028366	19	2050	68.5	50