Resource

Id	summary/zemke2023Conserved/pseudobulk_methylation/Human/L5-IT/CGNcontent_copy
Type	position_score
Version	0
Summary	Pseudo-bulk wc track in Human M1 region for L5-IT cell type
Description
Labels	assay: snm3C-seq brain_region: m1 cell_type: L5-IT data_types: methylation_signal dataset: zemke2023Conserved measure: CGN modalities: DNA_methylation processing_level: processed reference_genome: reference/Human/genome/GRCh38.p13 resolution: pseudo_bulk_cell_type species: human vendor: UCSD Single-cell Epigenomics Platform

Scores (1)

ID	Type	Default annotation	Description	Histogram	Range	Summary
zemke2023Conserved_Human_L5-IT_cgn_mc	float	zemke2023Conserved_Human_L5-IT_cgn_mc			[0, 1]	n 926,165,969 mean 0.848 sd 0.264

n counts base pairs; sd is the population standard deviation.

Chromosome	Covered positions	Covered %	Segments
all chromosomes	926165969	28.35%	16833925
chr1	74708350	30.01%	1359607
chr2	74472000	30.75%	1356116
chr3	58143350	29.32%	1060072
chr4	52315750	27.50%	954788
chr5	51978100	28.63%	950888
chr6	49749900	29.13%	904702
chr7	51542200	32.35%	936002
chr8	43663650	30.08%	795227
chr9	38980900	28.17%	709176
chr10	45673000	34.14%	831338
chr11	43199800	31.98%	790576
chr12	43286650	32.48%	789809
chr13	28298550	24.74%	515887
chr14	27873200	26.04%	507805
chr15	26615700	26.10%	483172
chr16	32045400	35.47%	585222
chr17	32785850	39.38%	594686
chr18	24169650	30.07%	438873
chr19	27929400	47.65%	512808
chr20	23987300	37.22%	436480
chr21	12226000	26.17%	223210
chr22	16703350	32.87%	304173
chrM	12019	72.54%	241
chrX	41470300	26.58%	713647
chrY	4335600	7.58%	79420
614 contigs with no values (178831587 bp)	0	0.00%	0

	segments	min	max	mean	median
segments	16833925	19	900	55.02	50