Resource

Id	summary/zemke2023Conserved/pseudobulk_methylation/Human/L5-IT/CHNcontent_copy
Type	position_score
Version	0
Summary	Pseudo-bulk wc track in Human M1 region for L5-IT cell type
Description
Labels	assay: snm3C-seq brain_region: m1 cell_type: L5-IT data_types: methylation_signal dataset: zemke2023Conserved measure: CHN modalities: DNA_methylation processing_level: processed reference_genome: reference/Human/genome/GRCh38.p13 resolution: pseudo_bulk_cell_type species: human vendor: UCSD Single-cell Epigenomics Platform

Scores (1)

ID	Type	Default annotation	Description	Histogram	Range	Summary
zemke2023Conserved_Human_L5-IT_chn_mc	float	zemke2023Conserved_Human_L5-IT_chn_mc			[0, 1]	n 2,790,106,319 mean 0.0628 sd 0.0571

n counts base pairs; sd is the population standard deviation.

Chromosome	Covered positions	Covered %	Segments
all chromosomes	2790106319	85.40%	55045523
chr1	220051450	88.39%	4349721
chr2	234915700	97.00%	4649136
chr3	194117400	97.89%	3846468
chr4	185333800	97.43%	3668538
chr5	173827250	95.75%	3440335
chr6	162381300	95.07%	3213105
chr7	152686800	95.82%	3014865
chr8	138679850	95.55%	2743075
chr9	113553250	82.05%	2239810
chr10	130029950	97.18%	2573316
chr11	130240450	96.41%	2574375
chr12	129711950	97.33%	2564659
chr13	94786150	82.88%	1876649
chr14	85053350	79.46%	1679303
chr15	75175350	73.71%	1480527
chr16	74613600	82.59%	1469072
chr17	73707600	88.53%	1448197
chr18	75429600	93.85%	1487386
chr19	53609150	91.46%	1056072
chr20	61577050	95.55%	1218007
chr21	34409500	73.67%	673450
chr22	34497100	67.88%	673798
chrM	16569	100.00%	332
chrX	144775750	92.78%	2791110
chrY	16926400	29.58%	314217
614 contigs with no values (178831587 bp)	0	0.00%	0

	segments	min	max	mean	median
segments	55045523	19	1000	50.69	50