Resource

Id	summary/zemke2023Conserved/pseudobulk_methylation/Human/L6-CT/CGNcontent_copy
Type	position_score
Version	0
Summary	Pseudo-bulk wc track in Human M1 region for L6-CT cell type
Description
Labels	assay: snm3C-seq brain_region: m1 cell_type: L6-CT data_types: methylation_signal dataset: zemke2023Conserved measure: CGN modalities: DNA_methylation processing_level: processed reference_genome: reference/Human/genome/GRCh38.p13 resolution: pseudo_bulk_cell_type species: human vendor: UCSD Single-cell Epigenomics Platform

Scores (1)

ID	Type	Default annotation	Description	Histogram	Range	Summary
zemke2023Conserved_Human_L6-CT_cgn_mc	float	zemke2023Conserved_Human_L6-CT_cgn_mc			[0, 1]	n 916,932,219 mean 0.851 sd 0.266

n counts base pairs; sd is the population standard deviation.

Chromosome	Covered positions	Covered %	Segments
all chromosomes	916932219	28.07%	15646210
chr1	74073800	29.75%	1263804
chr2	73868750	30.50%	1262645
chr3	57704950	29.10%	989804
chr4	51861350	27.26%	892247
chr5	51547950	28.40%	887635
chr6	49313900	28.87%	842175
chr7	51000050	32.01%	870611
chr8	43284500	29.82%	742655
chr9	38565700	27.87%	658105
chr10	45318600	33.87%	772510
chr11	42836700	31.71%	737014
chr12	42943800	32.22%	736460
chr13	28107250	24.58%	481545
chr14	27640200	25.82%	472751
chr15	26317950	25.80%	448706
chr16	31711200	35.10%	540425
chr17	32379600	38.89%	546208
chr18	23847750	29.67%	407493
chr19	27695650	47.25%	470603
chr20	23802150	36.93%	405780
chr21	12081750	25.87%	207114
chr22	16513500	32.50%	279152
chrM	12019	72.54%	239
chrX	40352250	25.86%	656824
chrY	4150900	7.25%	73705
614 contigs with no values (178831587 bp)	0	0.00%	0

	segments	min	max	mean	median
segments	15646210	19	1250	58.6	50