Resource

Id	summary/zemke2023Conserved/pseudobulk_methylation/Human/L6-IT/CGNcontent_copy
Type	position_score
Version	0
Summary	Pseudo-bulk wc track in Human M1 region for L6-IT cell type
Description
Labels	assay: snm3C-seq brain_region: m1 cell_type: L6-IT data_types: methylation_signal dataset: zemke2023Conserved measure: CGN modalities: DNA_methylation processing_level: processed reference_genome: reference/Human/genome/GRCh38.p13 resolution: pseudo_bulk_cell_type species: human vendor: UCSD Single-cell Epigenomics Platform

Scores (1)

ID	Type	Default annotation	Description	Histogram	Range	Summary
zemke2023Conserved_Human_L6-IT_cgn_mc	float	zemke2023Conserved_Human_L6-IT_cgn_mc			[0, 1]	n 927,834,069 mean 0.864 sd 0.245

n counts base pairs; sd is the population standard deviation.

Chromosome	Covered positions	Covered %	Segments
all chromosomes	927834069	28.40%	17083405
chr1	74809550	30.05%	1378634
chr2	74564050	30.79%	1375629
chr3	58214900	29.36%	1077152
chr4	52378350	27.54%	968559
chr5	52030750	28.66%	961174
chr6	49820750	29.17%	917724
chr7	51660800	32.42%	950760
chr8	43761100	30.15%	808770
chr9	39052200	28.22%	718061
chr10	45733150	34.18%	841890
chr11	43257100	32.02%	801899
chr12	43363750	32.54%	801422
chr13	28335800	24.78%	523262
chr14	27916750	26.08%	515827
chr15	26659550	26.14%	490173
chr16	32111550	35.55%	592682
chr17	32873500	39.48%	602955
chr18	24247750	30.17%	447088
chr19	27969500	47.72%	518319
chr20	24032200	37.29%	443471
chr21	12262050	26.25%	226825
chr22	16740150	32.94%	308221
chrM	12019	72.54%	241
chrX	41650800	26.69%	731849
chrY	4376000	7.65%	80818
614 contigs with no values (178831587 bp)	0	0.00%	0

	segments	min	max	mean	median
segments	17083405	19	1000	54.31	50