Resource

Id	summary/zemke2023Conserved/pseudobulk_methylation/Human/L6-IT/CHNcontent_copy
Type	position_score
Version	0
Summary	Pseudo-bulk wc track in Human M1 region for L6-IT cell type
Description
Labels	assay: snm3C-seq brain_region: m1 cell_type: L6-IT data_types: methylation_signal dataset: zemke2023Conserved measure: CHN modalities: DNA_methylation processing_level: processed reference_genome: reference/Human/genome/GRCh38.p13 resolution: pseudo_bulk_cell_type species: human vendor: UCSD Single-cell Epigenomics Platform

Scores (1)

ID	Type	Default annotation	Description	Histogram	Range	Summary
zemke2023Conserved_Human_L6-IT_chn_mc	float	zemke2023Conserved_Human_L6-IT_chn_mc			[0, 1]	n 2,793,625,969 mean 0.0763 sd 0.0657

n counts base pairs; sd is the population standard deviation.

Chromosome	Covered positions	Covered %	Segments
all chromosomes	2793625969	85.51%	55353408
chr1	220286650	88.48%	4371671
chr2	235114600	97.08%	4669513
chr3	194232700	97.95%	3861908
chr4	185462250	97.50%	3683365
chr5	173942850	95.82%	3454573
chr6	162544450	95.16%	3227181
chr7	152896450	95.95%	3031410
chr8	138882000	95.69%	2755569
chr9	113719000	82.17%	2251769
chr10	130148350	97.27%	2584200
chr11	130366350	96.51%	2586251
chr12	129866100	97.44%	2577843
chr13	94866400	82.95%	1884969
chr14	85156750	79.55%	1687521
chr15	75304850	73.83%	1489081
chr16	74744300	82.74%	1477592
chr17	73875350	88.73%	1457895
chr18	75632050	94.10%	1496423
chr19	53691500	91.60%	1062361
chr20	61660700	95.68%	1223437
chr21	34512950	73.89%	678106
chr22	34595350	68.08%	678798
chrM	16569	100.00%	332
chrX	145070050	92.97%	2838898
chrY	17037400	29.77%	322742
614 contigs with no values (178831587 bp)	0	0.00%	0

	segments	min	max	mean	median
segments	55353408	19	1100	50.47	50