Resource

Id	summary/zemke2023Conserved/pseudobulk_methylation/Human/Lamp5/CGNcontent_copy
Type	position_score
Version	0
Summary	Pseudo-bulk wc track in Human M1 region for Lamp5 cell type
Description
Labels	assay: snm3C-seq brain_region: m1 cell_type: Lamp5 data_types: methylation_signal dataset: zemke2023Conserved measure: CGN modalities: DNA_methylation processing_level: processed reference_genome: reference/Human/genome/GRCh38.p13 resolution: pseudo_bulk_cell_type species: human vendor: UCSD Single-cell Epigenomics Platform

Scores (1)

ID	Type	Default annotation	Description	Histogram	Range	Summary
zemke2023Conserved_Human_Lamp5_cgn_mc	float	zemke2023Conserved_Human_Lamp5_cgn_mc			[0, 1]	n 924,801,419 mean 0.873 sd 0.232

n counts base pairs; sd is the population standard deviation.

Chromosome	Covered positions	Covered %	Segments
all chromosomes	924801419	28.31%	16620507
chr1	74610250	29.97%	1341431
chr2	74383900	30.71%	1334984
chr3	58096300	29.30%	1049102
chr4	52238600	27.46%	943412
chr5	51920450	28.60%	939527
chr6	49692850	29.09%	894152
chr7	51482100	32.31%	924780
chr8	43617900	30.05%	785621
chr9	38923200	28.12%	700069
chr10	45618650	34.10%	818262
chr11	43133850	31.93%	782466
chr12	43242200	32.45%	780110
chr13	28269750	24.72%	509103
chr14	27844700	26.01%	501793
chr15	26553550	26.04%	476099
chr16	31990050	35.41%	575873
chr17	32701400	39.28%	584549
chr18	24112700	30.00%	433067
chr19	27896100	47.59%	508015
chr20	23960100	37.18%	431413
chr21	12197050	26.11%	219874
chr22	16669950	32.80%	298788
chrM	12019	72.54%	241
chrX	41331800	26.49%	707726
chrY	4302000	7.52%	80050
614 contigs with no values (178831587 bp)	0	0.00%	0

	segments	min	max	mean	median
segments	16620507	19	1050	55.64	50