Resource

Id	summary/zemke2023Conserved/pseudobulk_methylation/Human/Lamp5/CHNcontent_copy
Type	position_score
Version	0
Summary	Pseudo-bulk wc track in Human M1 region for Lamp5 cell type
Description
Labels	assay: snm3C-seq brain_region: m1 cell_type: Lamp5 data_types: methylation_signal dataset: zemke2023Conserved measure: CHN modalities: DNA_methylation processing_level: processed reference_genome: reference/Human/genome/GRCh38.p13 resolution: pseudo_bulk_cell_type species: human vendor: UCSD Single-cell Epigenomics Platform

Scores (1)

ID	Type	Default annotation	Description	Histogram	Range	Summary
zemke2023Conserved_Human_Lamp5_chn_mc	float	zemke2023Conserved_Human_Lamp5_chn_mc			[0, 1]	n 2,787,619,719 mean 0.0464 sd 0.046

n counts base pairs; sd is the population standard deviation.

Chromosome	Covered positions	Covered %	Segments
all chromosomes	2787619719	85.32%	54382250
chr1	219892450	88.33%	4308361
chr2	234767950	96.93%	4606230
chr3	194027300	97.85%	3816210
chr4	185181950	97.35%	3636113
chr5	173708950	95.69%	3408135
chr6	162265400	95.00%	3183341
chr7	152577950	95.75%	2979489
chr8	138580450	95.48%	2719205
chr9	113428150	81.96%	2214501
chr10	129947500	97.12%	2547918
chr11	130129350	96.33%	2543727
chr12	129658450	97.29%	2539388
chr13	94720400	82.82%	1860398
chr14	84993350	79.40%	1664044
chr15	75054650	73.59%	1463140
chr16	74498900	82.47%	1452164
chr17	73545800	88.34%	1430391
chr18	75314400	93.71%	1471368
chr19	53566200	91.38%	1039014
chr20	61512100	95.45%	1205468
chr21	34358400	73.56%	664394
chr22	34440000	67.77%	665267
chrM	16569	100.00%	331
chrX	144611800	92.68%	2683804
chrY	16821300	29.39%	279849
614 contigs with no values (178831587 bp)	0	0.00%	0

	segments	min	max	mean	median
segments	54382250	19	1350	51.26	50