Resource

Id	summary/zemke2023Conserved/pseudobulk_methylation/Human/Vip/CGNcontent_copy
Type	position_score
Version	0
Summary	Pseudo-bulk wc track in Human M1 region for Vip cell type
Description
Labels	assay: snm3C-seq brain_region: m1 cell_type: Vip data_types: methylation_signal dataset: zemke2023Conserved measure: CGN modalities: DNA_methylation processing_level: processed reference_genome: reference/Human/genome/GRCh38.p13 resolution: pseudo_bulk_cell_type species: human vendor: UCSD Single-cell Epigenomics Platform

Scores (1)

ID	Type	Default annotation	Description	Histogram	Range	Summary
zemke2023Conserved_Human_Vip_cgn_mc	float	zemke2023Conserved_Human_Vip_cgn_mc			[0, 1]	n 929,159,619 mean 0.881 sd 0.216

n counts base pairs; sd is the population standard deviation.

Chromosome	Covered positions	Covered %	Segments
all chromosomes	929159619	28.44%	17320710
chr1	74895450	30.08%	1397928
chr2	74637000	30.82%	1389990
chr3	58271550	29.39%	1089646
chr4	52450250	27.57%	981301
chr5	52108500	28.70%	976141
chr6	49889350	29.21%	930010
chr7	51751900	32.48%	965243
chr8	43804850	30.18%	817624
chr9	39134050	28.28%	730252
chr10	45785300	34.22%	853721
chr11	43322800	32.07%	814020
chr12	43410550	32.57%	811912
chr13	28363400	24.80%	529639
chr14	27945950	26.11%	522465
chr15	26711450	26.19%	497298
chr16	32153950	35.59%	600578
chr17	32918350	39.54%	612372
chr18	24325100	30.27%	453102
chr19	27995750	47.76%	528528
chr20	24052150	37.32%	450227
chr21	12291500	26.31%	229870
chr22	16769900	33.00%	313076
chrM	12019	72.54%	241
chrX	41759350	26.76%	742615
chrY	4399200	7.69%	82911
614 contigs with no values (178831587 bp)	0	0.00%	0

	segments	min	max	mean	median
segments	17320710	19	750	53.64	50