Resource

Id	summary/zemke2023Conserved/pseudobulk_methylation/Human/Vip/CHNcontent_copy
Type	position_score
Version	0
Summary	Pseudo-bulk wc track in Human M1 region for Vip cell type
Description
Labels	assay: snm3C-seq brain_region: m1 cell_type: Vip data_types: methylation_signal dataset: zemke2023Conserved measure: CHN modalities: DNA_methylation processing_level: processed reference_genome: reference/Human/genome/GRCh38.p13 resolution: pseudo_bulk_cell_type species: human vendor: UCSD Single-cell Epigenomics Platform

Scores (1)

ID	Type	Default annotation	Description	Histogram	Range	Summary
zemke2023Conserved_Human_Vip_chn_mc	float	zemke2023Conserved_Human_Vip_chn_mc			[0, 1]	n 2,796,272,969 mean 0.0569 sd 0.0504

n counts base pairs; sd is the population standard deviation.

Chromosome	Covered positions	Covered %	Segments
all chromosomes	2796272969	85.59%	55237991
chr1	220440650	88.55%	4366367
chr2	235216550	97.12%	4664209
chr3	194320200	98.00%	3857613
chr4	185613300	97.58%	3679009
chr5	174091200	95.90%	3450911
chr6	162654200	95.23%	3223428
chr7	153099550	96.08%	3025065
chr8	138957550	95.74%	2751938
chr9	113907200	82.31%	2248337
chr10	130243450	97.34%	2580199
chr11	130492950	96.60%	2580382
chr12	129953700	97.51%	2574543
chr13	94915200	82.99%	1883351
chr14	85236650	79.63%	1685880
chr15	75421050	73.95%	1487392
chr16	74830750	82.83%	1474224
chr17	73990400	88.87%	1455388
chr18	75782200	94.29%	1491681
chr19	53766500	91.72%	1058910
chr20	61710850	95.76%	1220927
chr21	34580150	74.03%	676427
chr22	34672100	68.23%	677651
chrM	16569	100.00%	332
chrX	145226300	93.07%	2811208
chrY	17133750	29.94%	312619
614 contigs with no values (178831587 bp)	0	0.00%	0

	segments	min	max	mean	median
segments	55237991	19	1000	50.62	50