Resource

Id	summary/zemke2023Conserved/pseudobulk_methylation/Human/Vsc/CHNcontent_copy
Type	position_score
Version	0
Summary	Pseudo-bulk wc track in Human M1 region for Vsc cell type
Description
Labels	assay: snm3C-seq brain_region: m1 cell_type: Vsc data_types: methylation_signal dataset: zemke2023Conserved measure: CHN modalities: DNA_methylation processing_level: processed reference_genome: reference/Human/genome/GRCh38.p13 resolution: pseudo_bulk_cell_type species: human vendor: UCSD Single-cell Epigenomics Platform

Scores (1)

ID	Type	Default annotation	Description	Histogram	Range	Summary
zemke2023Conserved_Human_Vsc_chn_mc	float	zemke2023Conserved_Human_Vsc_chn_mc			[0, 1]	n 2,790,979,069 mean 0.0126 sd 0.0171

n counts base pairs; sd is the population standard deviation.

Chromosome	Covered positions	Covered %	Segments
all chromosomes	2790979069	85.43%	50304046
chr1	220176450	88.44%	4040615
chr2	234991300	97.03%	4297064
chr3	194168000	97.92%	3568397
chr4	185326150	97.43%	3296276
chr5	173842350	95.76%	3148941
chr6	162419950	95.09%	2950031
chr7	152746800	95.86%	2763770
chr8	138725400	95.58%	2518710
chr9	113525300	82.03%	2061614
chr10	130067350	97.21%	2398695
chr11	130231600	96.41%	2380743
chr12	129759250	97.36%	2362792
chr13	94805800	82.90%	1704484
chr14	85075100	79.48%	1555645
chr15	75177500	73.71%	1386724
chr16	74678800	82.67%	1381080
chr17	73772700	88.61%	1374741
chr18	75400600	93.81%	1357743
chr19	53633600	91.50%	1003894
chr20	61589100	95.57%	1154307
chr21	34443700	73.74%	617061
chr22	34524850	67.94%	645837
chrM	16569	100.00%	332
chrX	144887450	92.85%	2106501
chrY	16993400	29.69%	228049
614 contigs with no values (178831587 bp)	0	0.00%	0

	segments	min	max	mean	median
segments	50304046	19	1450	55.48	50