Resource

Id	summary/zemke2023Conserved/pseudobulk_methylation/Macaque/CLA/CHNcontent_copy
Type	position_score
Version	0
Summary	Pseudo-bulk wc track in Macaque M1 region for CLA cell type
Description
Labels	assay: snm3C-seq brain_region: m1 cell_type: CLA data_types: methylation_signal dataset: zemke2023Conserved measure: CHN modalities: DNA_methylation processing_level: processed reference_genome: reference/Macaque/genome/rheMac10 resolution: pseudo_bulk_cell_type species: macaque vendor: UCSD Single-cell Epigenomics Platform

Scores (1)

ID	Type	Default annotation	Description	Histogram	Range	Summary
zemke2023Conserved_Macaque_CLA_chn_mc	float	zemke2023Conserved_Macaque_CLA_chn_mc			[0, 1]	n 2,543,034,921 mean 0.0414 sd 0.0734

n counts base pairs; sd is the population standard deviation.

Chromosome	Covered positions	Covered %	Segments
all chromosomes	2543034921	85.59%	34065735
chr1	203843792	91.16%	2759662
chr2	177478200	90.46%	2399149
chr3	167932397	90.63%	2273257
chr4	153451950	90.29%	2072473
chr5	168205900	89.80%	2229197
chr6	161534250	90.20%	2160470
chr7	153969850	90.64%	2080298
chr8	130905600	89.86%	1795474
chr9	120421550	89.78%	1663072
chr10	88402250	88.83%	1236408
chr11	119531450	89.83%	1572192
chr12	117321650	90.22%	1577414
chr13	98753330	90.82%	1358828
chr14	115246300	90.00%	1563015
chr15	101050300	89.20%	1377347
chr16	70834264	88.96%	952261
chr17	84808550	88.87%	1135730
chr18	66915393	89.85%	928857
chr19	50055700	85.84%	597413
chr20	70016045	90.77%	959097
chrM	2550	15.39%	39
chrX	114354150	74.55%	1295282
chrY	7999500	68.06%	78800
2916 contigs with no values (117338625 bp)	0	0.00%	0

	segments	min	max	mean	median
segments	34065735	14	3150	74.65	50