Resource

Id	summary/zemke2023Conserved/pseudobulk_methylation/Macaque/L4/CGNcontent_copy
Type	position_score
Version	0
Summary	Pseudo-bulk wc track in Macaque M1 region for L4 cell type
Description
Labels	assay: snm3C-seq brain_region: m1 cell_type: L4 data_types: methylation_signal dataset: zemke2023Conserved measure: CGN modalities: DNA_methylation processing_level: processed reference_genome: reference/Macaque/genome/rheMac10 resolution: pseudo_bulk_cell_type species: macaque vendor: UCSD Single-cell Epigenomics Platform

Scores (1)

ID	Type	Default annotation	Description	Histogram	Range	Summary
zemke2023Conserved_Macaque_L4_cgn_mc	float	zemke2023Conserved_Macaque_L4_cgn_mc			[0, 1]	n 962,531,383 mean 0.82 sd 0.27

n counts base pairs; sd is the population standard deviation.

Chromosome	Covered positions	Covered %	Segments
all chromosomes	962531383	32.39%	18378057
chr1	77658850	34.73%	1483996
chr2	59779400	30.47%	1144440
chr3	63883650	34.48%	1221771
chr4	53438700	31.44%	1020809
chr5	53985750	28.82%	1033123
chr6	54682450	30.53%	1046327
chr7	58434950	34.40%	1116983
chr8	46681150	32.04%	894384
chr9	47016900	35.05%	898805
chr10	41929050	42.13%	802159
chr11	45303800	34.05%	866349
chr12	40700100	31.30%	778813
chr13	37238100	34.25%	712065
chr14	43430650	33.92%	830298
chr15	38854100	34.30%	743225
chr16	35649900	44.77%	680564
chr17	29302200	30.70%	560579
chr18	24712850	33.18%	472915
chr19	29878833	51.24%	573734
chr20	33019150	42.81%	633451
chrM	2850	17.21%	51
chrX	44116450	28.76%	809349
chrY	2831550	24.09%	53867
2916 contigs with no values (117338625 bp)	0	0.00%	0

	segments	min	max	mean	median
segments	18378057	33	900	52.37	50