Resource

Id	summary/zemke2023Conserved/pseudobulk_methylation/Macaque/Sncg/CGNcontent_copy
Type	position_score
Version	0
Summary	Pseudo-bulk wc track in Macaque M1 region for Sncg cell type
Description
Labels	assay: snm3C-seq brain_region: m1 cell_type: Sncg data_types: methylation_signal dataset: zemke2023Conserved measure: CGN modalities: DNA_methylation processing_level: processed reference_genome: reference/Macaque/genome/rheMac10 resolution: pseudo_bulk_cell_type species: macaque vendor: UCSD Single-cell Epigenomics Platform

Scores (1)

ID	Type	Default annotation	Description	Histogram	Range	Summary
zemke2023Conserved_Macaque_Sncg_cgn_mc	float	zemke2023Conserved_Macaque_Sncg_cgn_mc			[0, 1]	n 935,418,800 mean 0.839 sd 0.273

n counts base pairs; sd is the population standard deviation.

Chromosome	Covered positions	Covered %	Segments
all chromosomes	935418800	31.48%	15357522
chr1	75763550	33.88%	1240051
chr2	58270000	29.70%	965821
chr3	62363300	33.66%	1021021
chr4	52065550	30.63%	860652
chr5	52576650	28.07%	879657
chr6	53308600	29.77%	887777
chr7	56936300	33.52%	933470
chr8	45551650	31.27%	756705
chr9	45918850	34.24%	750213
chr10	40936550	41.13%	659067
chr11	44090850	33.13%	723472
chr12	39754650	30.57%	656614
chr13	36381850	33.46%	597057
chr14	42274900	33.01%	696437
chr15	37895900	33.45%	618538
chr16	34653950	43.52%	556697
chr17	28508100	29.87%	470697
chr18	24133700	32.41%	396834
chr19	28831050	49.44%	470715
chr20	32300950	41.87%	523933
chrM	1900	11.47%	36
chrX	40292550	26.27%	646423
chrY	2607450	22.18%	45635
2916 contigs with no values (117338625 bp)	0	0.00%	0

	segments	min	max	mean	median
segments	15357522	50	1650	60.91	50