Resource

Id	summary/zemke2023Conserved/pseudobulk_methylation/Macaque/Vsc/CGNcontent_copy
Type	position_score
Version	0
Summary	Pseudo-bulk wc track in Macaque M1 region for Vsc cell type
Description
Labels	assay: snm3C-seq brain_region: m1 cell_type: Vsc data_types: methylation_signal dataset: zemke2023Conserved measure: CGN modalities: DNA_methylation processing_level: processed reference_genome: reference/Macaque/genome/rheMac10 resolution: pseudo_bulk_cell_type species: macaque vendor: UCSD Single-cell Epigenomics Platform

Scores (1)

ID	Type	Default annotation	Description	Histogram	Range	Summary
zemke2023Conserved_Macaque_Vsc_cgn_mc	float	zemke2023Conserved_Macaque_Vsc_cgn_mc			[0, 1]	n 886,484,650 mean 0.73 sd 0.338

n counts base pairs; sd is the population standard deviation.

Chromosome	Covered positions	Covered %	Segments
all chromosomes	886484650	29.83%	15058188
chr1	72194350	32.28%	1219984
chr2	55241200	28.16%	948175
chr3	59201300	31.95%	1003137
chr4	49406650	29.07%	838581
chr5	49734350	26.55%	863998
chr6	50768950	28.35%	877345
chr7	54253850	31.94%	921392
chr8	43235050	29.68%	745113
chr9	43861000	32.70%	743878
chr10	39267200	39.46%	659948
chr11	41962000	31.53%	710715
chr12	37754200	29.03%	647257
chr13	34759750	31.97%	591028
chr14	40152450	31.36%	682471
chr15	36267800	32.02%	613810
chr16	33136700	41.61%	543111
chr17	27060100	28.35%	466372
chr18	22994150	30.88%	395135
chr19	27449550	47.07%	445508
chr20	30856600	40.00%	518657
chrM	1650	9.96%	28
chrX	34703650	22.62%	583560
chrY	2222150	18.91%	38985
2916 contigs with no values (117338625 bp)	0	0.00%	0

	segments	min	max	mean	median
segments	15058188	50	2650	58.87	50