Resource

Id	summary/zemke2023Conserved/pseudobulk_methylation/Macaque/Vsc/CHNcontent_copy
Type	position_score
Version	0
Summary	Pseudo-bulk wc track in Macaque M1 region for Vsc cell type
Description
Labels	assay: snm3C-seq brain_region: m1 cell_type: Vsc data_types: methylation_signal dataset: zemke2023Conserved measure: CHN modalities: DNA_methylation processing_level: processed reference_genome: reference/Macaque/genome/rheMac10 resolution: pseudo_bulk_cell_type species: macaque vendor: UCSD Single-cell Epigenomics Platform

Scores (1)

ID	Type	Default annotation	Description	Histogram	Range	Summary
zemke2023Conserved_Macaque_Vsc_chn_mc	float	zemke2023Conserved_Macaque_Vsc_chn_mc			[0, 1]	n 2,698,053,472 mean 0.00944 sd 0.0309

n counts base pairs; sd is the population standard deviation.

Chromosome	Covered positions	Covered %	Segments
all chromosomes	2698053472	90.80%	21322982
chr1	214537942	95.94%	1759652
chr2	187690550	95.66%	1440083
chr3	177349100	95.71%	1378924
chr4	162097450	95.37%	1276239
chr5	178999750	95.56%	1286800
chr6	171171300	95.58%	1320303
chr7	162269900	95.53%	1340615
chr8	137890450	94.65%	1069604
chr9	126958600	94.66%	1071803
chr10	92715850	93.17%	841284
chr11	126326786	94.94%	1014410
chr12	124407850	95.67%	970680
chr13	104165600	95.80%	853854
chr14	121321406	94.74%	982701
chr15	106701050	94.19%	892535
chr16	74507650	93.57%	677837
chr17	90050250	94.36%	690691
chr18	70807793	95.08%	563234
chr19	52894650	90.70%	465472
chr20	73331695	95.07%	630548
chrM	2800	16.90%	48
chrX	132636300	86.47%	746348
chrY	9218750	78.43%	49317
2916 contigs with no values (117338625 bp)	0	0.00%	0

	segments	min	max	mean	median
segments	21322982	42	4400	126.53	50