Resource

Id	summary/zemke2023Conserved/pseudobulk_methylation/Marmoset/CLA/CGNcontent_copy
Type	position_score
Version	0
Summary	Pseudo-bulk wc track in Marmoset M1 region for CLA cell type
Description
Labels	assay: snm3C-seq brain_region: m1 cell_type: CLA data_types: methylation_signal dataset: zemke2023Conserved measure: CGN modalities: DNA_methylation processing_level: processed reference_genome: reference/Marmoset/genome/calJac4 resolution: pseudo_bulk_cell_type species: marmoset vendor: UCSD Single-cell Epigenomics Platform

Scores (1)

ID	Type	Default annotation	Description	Histogram	Range	Summary
zemke2023Conserved_Marmoset_CLA_cgn_mc	float	zemke2023Conserved_Marmoset_CLA_cgn_mc			[0, 1]	n 842,273,361 mean 0.817 sd 0.318

n counts base pairs; sd is the population standard deviation.

Chromosome	Covered positions	Covered %	Segments
all chromosomes	842273361	29.07%	13047325
chr1	66053800	30.31%	1010130
chr2	57695400	28.21%	896603
chr3	48548900	25.30%	769568
chr4	48497450	27.87%	752043
chr5	59393350	36.14%	887737
chr6	46013000	28.58%	715070
chr7	51422850	32.64%	779695
chr8	35293000	27.82%	547346
chr9	39932150	29.79%	613855
chr10	41919750	30.45%	644472
chr11	39298800	30.30%	606917
chr12	40773750	32.75%	619953
chr13	34882850	29.33%	537734
chr14	31951450	28.51%	495946
chr15	28845350	29.08%	449226
chr16	26925784	27.53%	418525
chr17	20065950	26.78%	313979
chr18	14580377	31.00%	222465
chr19	17325500	33.60%	262053
chr20	16412450	35.98%	245104
chr21	15490600	30.22%	238110
chr22	24238500	47.25%	353536
chrM	1400	8.49%	22
chrX	36359500	24.54%	661293
chrY	351450	4.27%	5943
939 contigs with no values (67606501 bp)	0	0.00%	0

	segments	min	max	mean	median
segments	13047325	27	2400	64.56	50