Resource

Id	summary/zemke2023Conserved/pseudobulk_methylation/Marmoset/CLA/CHNcontent_copy
Type	position_score
Version	0
Summary	Pseudo-bulk wc track in Marmoset M1 region for CLA cell type
Description
Labels	assay: snm3C-seq brain_region: m1 cell_type: CLA data_types: methylation_signal dataset: zemke2023Conserved measure: CHN modalities: DNA_methylation processing_level: processed reference_genome: reference/Marmoset/genome/calJac4 resolution: pseudo_bulk_cell_type species: marmoset vendor: UCSD Single-cell Epigenomics Platform

Scores (1)

ID	Type	Default annotation	Description	Histogram	Range	Summary
zemke2023Conserved_Marmoset_CLA_chn_mc	float	zemke2023Conserved_Marmoset_CLA_chn_mc			[0, 1]	n 2,677,080,689 mean 0.0367 sd 0.058

n counts base pairs; sd is the population standard deviation.

Chromosome	Covered positions	Covered %	Segments
all chromosomes	2677080689	92.38%	39233949
chr1	206893200	94.92%	3097280
chr2	195387500	95.55%	2886210
chr3	182827123	95.27%	2624380
chr4	165180350	94.91%	2427611
chr5	156578000	95.27%	2368497
chr6	153343950	95.24%	2265770
chr7	150911950	95.79%	2266005
chr8	121304950	95.63%	1782679
chr9	127020500	94.76%	1840210
chr10	130855825	95.05%	1915244
chr11	123524750	95.25%	1842328
chr12	117993764	94.78%	1768649
chr13	112613850	94.69%	1687096
chr14	106017467	94.58%	1590172
chr15	94462900	95.23%	1399272
chr16	92930184	95.00%	1393289
chr17	70953150	94.68%	1050187
chr18	43651677	92.81%	640469
chr19	48056550	93.19%	717825
chr20	43097250	94.48%	669400
chr21	48270500	94.17%	691377
chr22	46422500	90.49%	634414
chrM	2599	15.75%	42
chrX	137787600	92.99%	1663564
chrY	992600	12.06%	11979
939 contigs with no values (67606501 bp)	0	0.00%	0

	segments	min	max	mean	median
segments	39233949	17	3250	68.23	50