Resource

Id	summary/zemke2023Conserved/pseudobulk_methylation/Marmoset/L4/CGNcontent_copy
Type	position_score
Version	0
Summary	Pseudo-bulk wc track in Marmoset M1 region for L4 cell type
Description
Labels	assay: snm3C-seq brain_region: m1 cell_type: L4 data_types: methylation_signal dataset: zemke2023Conserved measure: CGN modalities: DNA_methylation processing_level: processed reference_genome: reference/Marmoset/genome/calJac4 resolution: pseudo_bulk_cell_type species: marmoset vendor: UCSD Single-cell Epigenomics Platform

Scores (1)

ID	Type	Default annotation	Description	Histogram	Range	Summary
zemke2023Conserved_Marmoset_L4_cgn_mc	float	zemke2023Conserved_Marmoset_L4_cgn_mc			[0, 1]	n 905,955,061 mean 0.822 sd 0.263

n counts base pairs; sd is the population standard deviation.

Chromosome	Covered positions	Covered %	Segments
all chromosomes	905955061	31.26%	17628004
chr1	70918450	32.54%	1378410
chr2	61955100	30.30%	1204473
chr3	52748050	27.49%	1025270
chr4	52378700	30.10%	1017018
chr5	63123400	38.41%	1228209
chr6	49465800	30.72%	961390
chr7	54867750	34.83%	1067236
chr8	38006150	29.96%	738298
chr9	43082100	32.14%	837127
chr10	45130050	32.78%	877737
chr11	42017500	32.40%	818328
chr12	43495600	34.94%	846650
chr13	37807550	31.79%	734160
chr14	34311450	30.61%	666073
chr15	30924250	31.17%	601717
chr16	29013334	29.66%	563608
chr17	21703400	28.96%	421674
chr18	15748677	33.49%	304651
chr19	18564400	36.00%	360019
chr20	17454850	38.27%	340177
chr21	16797900	32.77%	326341
chr22	25956050	50.60%	505724
chrM	2850	17.27%	41
chrX	39603700	26.73%	787431
chrY	878000	10.67%	16242
939 contigs with no values (67606501 bp)	0	0.00%	0

	segments	min	max	mean	median
segments	17628004	27	800	51.39	50