Resource

Id	summary/zemke2023Conserved/pseudobulk_methylation/Marmoset/L5-ET/CGNcontent_copy
Type	position_score
Version	0
Summary	Pseudo-bulk wc track in Marmoset M1 region for L5-ET cell type
Description
Labels	assay: snm3C-seq brain_region: m1 cell_type: L5-ET data_types: methylation_signal dataset: zemke2023Conserved measure: CGN modalities: DNA_methylation processing_level: processed reference_genome: reference/Marmoset/genome/calJac4 resolution: pseudo_bulk_cell_type species: marmoset vendor: UCSD Single-cell Epigenomics Platform

Scores (1)

ID	Type	Default annotation	Description	Histogram	Range	Summary
zemke2023Conserved_Marmoset_L5-ET_cgn_mc	float	zemke2023Conserved_Marmoset_L5-ET_cgn_mc			[0, 1]	n 865,898,434 mean 0.827 sd 0.301

n counts base pairs; sd is the population standard deviation.

Chromosome	Covered positions	Covered %	Segments
all chromosomes	865898434	29.88%	13647264
chr1	67630550	31.03%	1050092
chr2	59199450	28.95%	931453
chr3	50138900	26.13%	807600
chr4	49916850	28.68%	786770
chr5	60820450	37.01%	927028
chr6	47259000	29.35%	748443
chr7	52831650	33.53%	819818
chr8	36384150	28.68%	575942
chr9	41253100	30.78%	647012
chr10	43139800	31.34%	675684
chr11	40101350	30.92%	625817
chr12	41867300	33.63%	649000
chr13	36066750	30.32%	566510
chr14	32723250	29.19%	516145
chr15	29689950	29.93%	469633
chr16	27764934	28.38%	441071
chr17	20687500	27.60%	328564
chr18	15040350	31.98%	233647
chr19	17743350	34.41%	273119
chr20	16829900	36.90%	255531
chr21	15971150	31.16%	251095
chr22	24910000	48.56%	371877
chrM	1550	9.39%	19
chrX	37529050	25.33%	688663
chrY	398150	4.84%	6731
939 contigs with no values (67606501 bp)	0	0.00%	0

	segments	min	max	mean	median
segments	13647264	34	2000	63.45	50