Resource

Id	summary/zemke2023Conserved/pseudobulk_methylation/Marmoset/L5-ET/CHNcontent_copy
Type	position_score
Version	0
Summary	Pseudo-bulk wc track in Marmoset M1 region for L5-ET cell type
Description
Labels	assay: snm3C-seq brain_region: m1 cell_type: L5-ET data_types: methylation_signal dataset: zemke2023Conserved measure: CHN modalities: DNA_methylation processing_level: processed reference_genome: reference/Marmoset/genome/calJac4 resolution: pseudo_bulk_cell_type species: marmoset vendor: UCSD Single-cell Epigenomics Platform

Scores (1)

ID	Type	Default annotation	Description	Histogram	Range	Summary
zemke2023Conserved_Marmoset_L5-ET_chn_mc	float	zemke2023Conserved_Marmoset_L5-ET_chn_mc			[0, 1]	n 2,708,741,581 mean 0.0548 sd 0.0682

n counts base pairs; sd is the population standard deviation.

Chromosome	Covered positions	Covered %	Segments
all chromosomes	2708741581	93.48%	45896116
chr1	209127600	95.95%	3578670
chr2	197492479	96.58%	3353178
chr3	185372173	96.59%	3134597
chr4	167214500	96.08%	2845663
chr5	158100800	96.20%	2714096
chr6	155080700	96.32%	2627938
chr7	152569908	96.84%	2618639
chr8	122851350	96.85%	2095766
chr9	128807100	96.09%	2187217
chr10	132418025	96.18%	2250808
chr11	124551850	96.04%	2105138
chr12	119301764	95.83%	2049929
chr13	114186600	96.01%	1961679
chr14	107111967	95.56%	1819252
chr15	95548200	96.32%	1640027
chr16	94163434	96.26%	1616283
chr17	71836303	95.85%	1229147
chr18	44214650	94.01%	753409
chr19	48531679	94.11%	816342
chr20	43561500	95.50%	763161
chr21	48970050	95.53%	807558
chr22	47056400	91.73%	765375
chrM	2999	18.18%	50
chrX	139545050	94.18%	2147679
chrY	1124500	13.67%	14515
939 contigs with no values (67606501 bp)	0	0.00%	0

	segments	min	max	mean	median
segments	45896116	25	2950	59.02	50