Resource

Id	summary/zemke2023Conserved/pseudobulk_methylation/Marmoset/L5-IT/CGNcontent_copy
Type	position_score
Version	0
Summary	Pseudo-bulk wc track in Marmoset M1 region for L5-IT cell type
Description
Labels	assay: snm3C-seq brain_region: m1 cell_type: L5-IT data_types: methylation_signal dataset: zemke2023Conserved measure: CGN modalities: DNA_methylation processing_level: processed reference_genome: reference/Marmoset/genome/calJac4 resolution: pseudo_bulk_cell_type species: marmoset vendor: UCSD Single-cell Epigenomics Platform

Scores (1)

ID	Type	Default annotation	Description	Histogram	Range	Summary
zemke2023Conserved_Marmoset_L5-IT_cgn_mc	float	zemke2023Conserved_Marmoset_L5-IT_cgn_mc			[0, 1]	n 905,425,561 mean 0.816 sd 0.273

n counts base pairs; sd is the population standard deviation.

Chromosome	Covered positions	Covered %	Segments
all chromosomes	905425561	31.25%	17515645
chr1	70878250	32.52%	1368806
chr2	61930850	30.29%	1197461
chr3	52712250	27.47%	1018387
chr4	52346450	30.08%	1009399
chr5	63102000	38.39%	1220944
chr6	49429050	30.70%	955282
chr7	54845500	34.81%	1060612
chr8	37982400	29.94%	733651
chr9	43060800	32.12%	831995
chr10	45102900	32.76%	872079
chr11	41996850	32.38%	813076
chr12	43474100	34.92%	840694
chr13	37787600	31.77%	728836
chr14	34294550	30.60%	662397
chr15	30915800	31.17%	597620
chr16	28999834	29.65%	560050
chr17	21689750	28.94%	418504
chr18	15738427	33.46%	302797
chr19	18557250	35.98%	357829
chr20	17446650	38.25%	337530
chr21	16786400	32.75%	324090
chr22	25938800	50.56%	502445
chrM	2500	15.15%	40
chrX	39559300	26.70%	785530
chrY	847300	10.30%	15591
939 contigs with no values (67606501 bp)	0	0.00%	0

	segments	min	max	mean	median
segments	17515645	27	1350	51.69	50