Resource

Id	summary/zemke2023Conserved/pseudobulk_methylation/Marmoset/L6-CT/CGNcontent_copy
Type	position_score
Version	0
Summary	Pseudo-bulk wc track in Marmoset M1 region for L6-CT cell type
Description
Labels	assay: snm3C-seq brain_region: m1 cell_type: L6-CT data_types: methylation_signal dataset: zemke2023Conserved measure: CGN modalities: DNA_methylation processing_level: processed reference_genome: reference/Marmoset/genome/calJac4 resolution: pseudo_bulk_cell_type species: marmoset vendor: UCSD Single-cell Epigenomics Platform

Scores (1)

ID	Type	Default annotation	Description	Histogram	Range	Summary
zemke2023Conserved_Marmoset_L6-CT_cgn_mc	float	zemke2023Conserved_Marmoset_L6-CT_cgn_mc			[0, 1]	n 905,196,011 mean 0.834 sd 0.256

n counts base pairs; sd is the population standard deviation.

Chromosome	Covered positions	Covered %	Segments
all chromosomes	905196011	31.24%	17452534
chr1	70861850	32.51%	1363184
chr2	61921800	30.28%	1193588
chr3	52699500	27.46%	1014846
chr4	52332400	30.07%	1005499
chr5	63089700	38.39%	1216739
chr6	49417050	30.69%	951644
chr7	54836500	34.81%	1055576
chr8	37974550	29.94%	730927
chr9	43048200	32.11%	828355
chr10	45086150	32.75%	868451
chr11	41985650	32.37%	809912
chr12	43463550	34.91%	838248
chr13	37774750	31.76%	725700
chr14	34288500	30.59%	660064
chr15	30901850	31.15%	595212
chr16	28994334	29.64%	558321
chr17	21685250	28.94%	416879
chr18	15733477	33.45%	301887
chr19	18547150	35.96%	356808
chr20	17446300	38.25%	336893
chr21	16783300	32.74%	322848
chr22	25929250	50.54%	500840
chrM	2750	16.67%	39
chrX	39551250	26.69%	784660
chrY	840950	10.22%	15414
939 contigs with no values (67606501 bp)	0	0.00%	0

	segments	min	max	mean	median
segments	17452534	27	900	51.87	50