Resource

Id	summary/zemke2023Conserved/pseudobulk_methylation/Marmoset/L6-IT/CGNcontent_copy
Type	position_score
Version	0
Summary	Pseudo-bulk wc track in Marmoset M1 region for L6-IT cell type
Description
Labels	assay: snm3C-seq brain_region: m1 cell_type: L6-IT data_types: methylation_signal dataset: zemke2023Conserved measure: CGN modalities: DNA_methylation processing_level: processed reference_genome: reference/Marmoset/genome/calJac4 resolution: pseudo_bulk_cell_type species: marmoset vendor: UCSD Single-cell Epigenomics Platform

Scores (1)

ID	Type	Default annotation	Description	Histogram	Range	Summary
zemke2023Conserved_Marmoset_L6-IT_cgn_mc	float	zemke2023Conserved_Marmoset_L6-IT_cgn_mc			[0, 1]	n 905,955,061 mean 0.833 sd 0.26

n counts base pairs; sd is the population standard deviation.

Chromosome	Covered positions	Covered %	Segments
all chromosomes	905955061	31.26%	17584020
chr1	70915550	32.54%	1373469
chr2	61963700	30.30%	1201963
chr3	52744700	27.48%	1022858
chr4	52376850	30.09%	1014543
chr5	63125750	38.41%	1224656
chr6	49457350	30.72%	958491
chr7	54869200	34.83%	1064747
chr8	38006900	29.96%	736658
chr9	43078200	32.14%	834989
chr10	45123300	32.78%	874724
chr11	42018900	32.40%	815813
chr12	43498900	34.94%	843798
chr13	37808700	31.79%	732285
chr14	34313650	30.61%	664833
chr15	30925750	31.18%	600245
chr16	29018234	29.67%	562344
chr17	21702000	28.96%	420374
chr18	15748977	33.49%	304359
chr19	18564250	36.00%	359650
chr20	17454250	38.26%	338974
chr21	16799600	32.77%	325751
chr22	25957050	50.60%	505035
chrM	2700	16.36%	50
chrX	39593050	26.72%	787052
chrY	887550	10.79%	16359
939 contigs with no values (67606501 bp)	0	0.00%	0

	segments	min	max	mean	median
segments	17584020	27	950	51.52	50