Resource

Id	summary/zemke2023Conserved/pseudobulk_methylation/Marmoset/L6-IT/CHNcontent_copy
Type	position_score
Version	0
Summary	Pseudo-bulk wc track in Marmoset M1 region for L6-IT cell type
Description
Labels	assay: snm3C-seq brain_region: m1 cell_type: L6-IT data_types: methylation_signal dataset: zemke2023Conserved measure: CHN modalities: DNA_methylation processing_level: processed reference_genome: reference/Marmoset/genome/calJac4 resolution: pseudo_bulk_cell_type species: marmoset vendor: UCSD Single-cell Epigenomics Platform

Scores (1)

ID	Type	Default annotation	Description	Histogram	Range	Summary
zemke2023Conserved_Marmoset_L6-IT_chn_mc	float	zemke2023Conserved_Marmoset_L6-IT_chn_mc			[0, 1]	n 2,757,741,022 mean 0.0548 sd 0.0509

n counts base pairs; sd is the population standard deviation.

Chromosome	Covered positions	Covered %	Segments
all chromosomes	2757741022	95.17%	54807664
chr1	213222735	97.83%	4240999
chr2	200830829	98.21%	3994516
chr3	188718173	98.34%	3751935
chr4	170306950	97.85%	3386070
chr5	160534700	97.68%	3194930
chr6	157850506	98.04%	3137834
chr7	154806358	98.26%	3080997
chr8	124777850	98.37%	2482710
chr9	130950550	97.69%	2603187
chr10	134728775	97.86%	2678744
chr11	126820950	97.79%	2522230
chr12	121178714	97.34%	2408869
chr13	116245700	97.74%	2311376
chr14	109157867	97.38%	2169411
chr15	96943300	97.73%	1929388
chr16	95724534	97.86%	1903776
chr17	73085650	97.52%	1453739
chr18	45028327	95.74%	895040
chr19	49455429	95.90%	981221
chr20	44232600	96.97%	879437
chr21	49982192	97.51%	991941
chr22	48102730	93.77%	951598
chrM	5199	31.51%	81
chrX	142429354	96.13%	2820046
chrY	2621050	31.85%	37589
939 contigs with no values (67606501 bp)	0	0.00%	0

	segments	min	max	mean	median
segments	54807664	4	1250	50.32	50