Resource

Id	summary/zemke2023Conserved/pseudobulk_methylation/Marmoset/Lamp5/CGNcontent_copy
Type	position_score
Version	0
Summary	Pseudo-bulk wc track in Marmoset M1 region for Lamp5 cell type
Description
Labels	assay: snm3C-seq brain_region: m1 cell_type: Lamp5 data_types: methylation_signal dataset: zemke2023Conserved measure: CGN modalities: DNA_methylation processing_level: processed reference_genome: reference/Marmoset/genome/calJac4 resolution: pseudo_bulk_cell_type species: marmoset vendor: UCSD Single-cell Epigenomics Platform

Scores (1)

ID	Type	Default annotation	Description	Histogram	Range	Summary
zemke2023Conserved_Marmoset_Lamp5_cgn_mc	float	zemke2023Conserved_Marmoset_Lamp5_cgn_mc			[0, 1]	n 882,935,984 mean 0.829 sd 0.279

n counts base pairs; sd is the population standard deviation.

Chromosome	Covered positions	Covered %	Segments
all chromosomes	882935984	30.47%	14675724
chr1	69031750	31.67%	1137329
chr2	60474550	29.57%	1004547
chr3	51308850	26.74%	862078
chr4	51017450	29.31%	847703
chr5	61853200	37.63%	1007818
chr6	48172450	29.92%	800197
chr7	53686900	34.08%	876322
chr8	37108600	29.25%	614983
chr9	41960750	31.30%	693530
chr10	43974000	31.94%	726434
chr11	41028200	31.64%	681682
chr12	42497900	34.14%	698211
chr13	36821200	30.96%	607714
chr14	33387900	29.79%	552322
chr15	30187700	30.43%	500797
chr16	28279384	28.91%	469884
chr17	21131750	28.20%	351796
chr18	15305950	32.54%	250870
chr19	18122500	35.14%	294212
chr20	17101750	37.49%	278656
chr21	16353700	31.90%	271423
chr22	25282000	49.28%	410122
chrM	1750	10.61%	24
chrX	38387300	25.91%	729159
chrY	458500	5.57%	7911
939 contigs with no values (67606501 bp)	0	0.00%	0

	segments	min	max	mean	median
segments	14675724	34	2150	60.16	50