Resource

Id	summary/zemke2023Conserved/pseudobulk_methylation/Marmoset/Sncg/CHNcontent_copy
Type	position_score
Version	0
Summary	Pseudo-bulk wc track in Marmoset M1 region for Sncg cell type
Description
Labels	assay: snm3C-seq brain_region: m1 cell_type: Sncg data_types: methylation_signal dataset: zemke2023Conserved measure: CHN modalities: DNA_methylation processing_level: processed reference_genome: reference/Marmoset/genome/calJac4 resolution: pseudo_bulk_cell_type species: marmoset vendor: UCSD Single-cell Epigenomics Platform

Scores (1)

ID	Type	Default annotation	Description	Histogram	Range	Summary
zemke2023Conserved_Marmoset_Sncg_chn_mc	float	zemke2023Conserved_Marmoset_Sncg_chn_mc			[0, 1]	n 2,554,094,988 mean 0.0353 sd 0.0663

n counts base pairs; sd is the population standard deviation.

Chromosome	Covered positions	Covered %	Segments
all chromosomes	2554094988	88.14%	32547170
chr1	197777800	90.74%	2606093
chr2	186160800	91.04%	2376048
chr3	173661900	90.49%	2174458
chr4	155816250	89.53%	1957422
chr5	150654750	91.67%	1986678
chr6	146675650	91.10%	1922471
chr7	144828900	91.93%	1899863
chr8	116299800	91.68%	1517110
chr9	121192300	90.41%	1527172
chr10	125468675	91.14%	1599006
chr11	117917700	90.92%	1511101
chr12	112699614	90.53%	1476145
chr13	108428050	91.17%	1467240
chr14	100591050	89.74%	1293305
chr15	89839400	90.56%	1160905
chr16	88558500	90.53%	1168098
chr17	67450450	90.00%	880934
chr18	41643400	88.54%	536516
chr19	45869400	88.94%	603266
chr20	41224150	90.37%	559409
chr21	45666350	89.09%	566644
chr22	44405950	86.56%	498026
chrM	2199	13.33%	32
chrX	130475750	88.06%	1250131
chrY	786200	9.55%	9097
939 contigs with no values (67606501 bp)	0	0.00%	0

	segments	min	max	mean	median
segments	32547170	50	3150	78.47	50