Resource

Id	summary/zemke2023Conserved/pseudobulk_methylation/Marmoset/Sst/CGNcontent_copy
Type	position_score
Version	0
Summary	Pseudo-bulk wc track in Marmoset M1 region for Sst cell type
Description
Labels	assay: snm3C-seq brain_region: m1 cell_type: Sst data_types: methylation_signal dataset: zemke2023Conserved measure: CGN modalities: DNA_methylation processing_level: processed reference_genome: reference/Marmoset/genome/calJac4 resolution: pseudo_bulk_cell_type species: marmoset vendor: UCSD Single-cell Epigenomics Platform

Scores (1)

ID	Type	Default annotation	Description	Histogram	Range	Summary
zemke2023Conserved_Marmoset_Sst_cgn_mc	float	zemke2023Conserved_Marmoset_Sst_cgn_mc			[0, 1]	n 900,597,011 mean 0.85 sd 0.242

n counts base pairs; sd is the population standard deviation.

Chromosome	Covered positions	Covered %	Segments
all chromosomes	900597011	31.08%	16379460
chr1	70487250	32.34%	1275614
chr2	61642650	30.15%	1120358
chr3	52421550	27.32%	954520
chr4	52052950	29.91%	941309
chr5	62857000	38.25%	1136552
chr6	49160500	30.53%	892419
chr7	54646400	34.69%	987149
chr8	37811650	29.81%	686160
chr9	42840200	31.96%	777200
chr10	44844600	32.57%	811464
chr11	41784650	32.22%	761382
chr12	43271900	34.76%	785202
chr13	37570100	31.59%	679348
chr14	34094850	30.42%	616774
chr15	30766250	31.01%	557128
chr16	28856234	29.50%	523366
chr17	21568600	28.78%	390217
chr18	15636427	33.25%	280258
chr19	18458450	35.79%	331840
chr20	17381600	38.10%	314601
chr21	16686050	32.55%	302829
chr22	25796600	50.29%	469936
chrM	2000	12.12%	31
chrX	39276500	26.51%	771610
chrY	682050	8.29%	12193
939 contigs with no values (67606501 bp)	0	0.00%	0

	segments	min	max	mean	median
segments	16379460	27	1100	54.98	50