Resource

Id	summary/zemke2023Conserved/pseudobulk_methylation/Marmoset/Vip/CGNcontent_copy
Type	position_score
Version	0
Summary	Pseudo-bulk wc track in Marmoset M1 region for Vip cell type
Description
Labels	assay: snm3C-seq brain_region: m1 cell_type: Vip data_types: methylation_signal dataset: zemke2023Conserved measure: CGN modalities: DNA_methylation processing_level: processed reference_genome: reference/Marmoset/genome/calJac4 resolution: pseudo_bulk_cell_type species: marmoset vendor: UCSD Single-cell Epigenomics Platform

Scores (1)

ID	Type	Default annotation	Description	Histogram	Range	Summary
zemke2023Conserved_Marmoset_Vip_cgn_mc	float	zemke2023Conserved_Marmoset_Vip_cgn_mc			[0, 1]	n 895,611,761 mean 0.843 sd 0.247

n counts base pairs; sd is the population standard deviation.

Chromosome	Covered positions	Covered %	Segments
all chromosomes	895611761	30.91%	15772853
chr1	70079150	32.15%	1226193
chr2	61296750	29.98%	1075928
chr3	52106900	27.15%	922117
chr4	51768400	29.74%	909050
chr5	62616500	38.10%	1093023
chr6	48879800	30.36%	859867
chr7	54388850	34.52%	947367
chr8	37616800	29.65%	660623
chr9	42597000	31.78%	746377
chr10	44589600	32.39%	780905
chr11	41557950	32.04%	731510
chr12	43095800	34.62%	758705
chr13	37355750	31.41%	652915
chr14	33903850	30.25%	594286
chr15	30604500	30.85%	537364
chr16	28702034	29.34%	505077
chr17	21443100	28.61%	376147
chr18	15540427	33.04%	269111
chr19	18355850	35.59%	318857
chr20	17291250	37.91%	301184
chr21	16584150	32.35%	291241
chr22	25646700	49.99%	448253
chrM	1800	10.91%	23
chrX	39001500	26.32%	756348
chrY	587350	7.14%	10382
939 contigs with no values (67606501 bp)	0	0.00%	0

	segments	min	max	mean	median
segments	15772853	27	1350	56.78	50