Resource

Id	summary/zemke2023Conserved/pseudobulk_methylation/Marmoset/Vip/CHNcontent_copy
Type	position_score
Version	0
Summary	Pseudo-bulk wc track in Marmoset M1 region for Vip cell type
Description
Labels	assay: snm3C-seq brain_region: m1 cell_type: Vip data_types: methylation_signal dataset: zemke2023Conserved measure: CHN modalities: DNA_methylation processing_level: processed reference_genome: reference/Marmoset/genome/calJac4 resolution: pseudo_bulk_cell_type species: marmoset vendor: UCSD Single-cell Epigenomics Platform

Scores (1)

ID	Type	Default annotation	Description	Histogram	Range	Summary
zemke2023Conserved_Marmoset_Vip_chn_mc	float	zemke2023Conserved_Marmoset_Vip_chn_mc			[0, 1]	n 2,742,420,926 mean 0.0367 sd 0.0416

n counts base pairs; sd is the population standard deviation.

Chromosome	Covered positions	Covered %	Segments
all chromosomes	2742420926	94.64%	50442431
chr1	211993200	97.26%	3923645
chr2	199900850	97.76%	3670752
chr3	187816350	97.87%	3440704
chr4	169412650	97.34%	3122867
chr5	159819100	97.24%	2982523
chr6	157000156	97.51%	2901128
chr7	154169150	97.86%	2861774
chr8	124241654	97.94%	2305648
chr9	130288850	97.20%	2393972
chr10	133997025	97.33%	2463498
chr11	126174900	97.29%	2329207
chr12	120602414	96.88%	2244227
chr13	115612300	97.21%	2150310
chr14	108495467	96.79%	2003733
chr15	96504150	97.28%	1794132
chr16	95257734	97.38%	1768221
chr17	72711150	97.02%	1348736
chr18	44743477	95.14%	824114
chr19	49168000	95.34%	909416
chr20	44000450	96.46%	823735
chr21	49678900	96.92%	904401
chr22	47706600	92.99%	844255
chrM	3149	19.09%	49
chrX	141430050	95.45%	2411230
chrY	1693200	20.58%	20154
939 contigs with no values (67606501 bp)	0	0.00%	0

	segments	min	max	mean	median
segments	50442431	17	2000	54.37	50