Resource

Id	summary/zemke2023Conserved/pseudobulk_methylation/Marmoset/Vsc/CGNcontent_copy
Type	position_score
Version	0
Summary	Pseudo-bulk wc track in Marmoset M1 region for Vsc cell type
Description
Labels	assay: snm3C-seq brain_region: m1 cell_type: Vsc data_types: methylation_signal dataset: zemke2023Conserved measure: CGN modalities: DNA_methylation processing_level: processed reference_genome: reference/Marmoset/genome/calJac4 resolution: pseudo_bulk_cell_type species: marmoset vendor: UCSD Single-cell Epigenomics Platform

Scores (1)

ID	Type	Default annotation	Description	Histogram	Range	Summary
zemke2023Conserved_Marmoset_Vsc_cgn_mc	float	zemke2023Conserved_Marmoset_Vsc_cgn_mc			[0, 1]	n 895,127,334 mean 0.773 sd 0.268

n counts base pairs; sd is the population standard deviation.

Chromosome	Covered positions	Covered %	Segments
all chromosomes	895127334	30.89%	16576710
chr1	70022250	32.13%	1292281
chr2	61279050	29.97%	1136913
chr3	52085400	27.14%	969717
chr4	51710000	29.71%	952704
chr5	62595200	38.09%	1153466
chr6	48861750	30.35%	905246
chr7	54411050	34.54%	1004769
chr8	37577200	29.62%	695921
chr9	42574050	31.76%	785493
chr10	44562600	32.37%	818794
chr11	41556100	32.04%	772987
chr12	43049200	34.58%	797611
chr13	37301900	31.36%	689610
chr14	33911700	30.25%	629320
chr15	30616800	30.86%	566719
chr16	28674434	29.31%	533457
chr17	21423450	28.59%	395298
chr18	15546750	33.06%	284469
chr19	18364750	35.61%	338577
chr20	17298900	37.92%	319433
chr21	16573150	32.33%	308416
chr22	25636100	49.97%	464282
chrM	2100	12.73%	33
chrX	38942150	26.28%	751329
chrY	551300	6.70%	9865
939 contigs with no values (67606501 bp)	0	0.00%	0

	segments	min	max	mean	median
segments	16576710	34	1200	54	50