Resource

Id	summary/zemke2023Conserved/pseudobulk_methylation/Mouse/L5-ET/CHNcontent_copy
Type	position_score
Version	0
Summary	Pseudo-bulk wc track in Mouse M1 region for L5-ET cell type
Description
Labels	assay: snm3C-seq brain_region: mop cell_type: L5-ET data_types: methylation_signal dataset: zemke2023Conserved measure: CHN modalities: DNA_methylation processing_level: processed reference_genome: reference/Mouse/genome/GRCm38 resolution: pseudo_bulk_cell_type species: mouse vendor: UCSD Single-cell Epigenomics Platform

Scores (1)

ID	Type	Default annotation	Description	Histogram	Range	Summary
zemke2023Conserved_Mouse_L5-ET_chn_mc	float	zemke2023Conserved_Mouse_L5-ET_chn_mc			[0, 1]	n 2,414,012,549 mean 0.0368 sd 0.055

n counts base pairs; sd is the population standard deviation.

Chromosome	Covered positions	Covered %	Segments
all chromosomes	2414012549	88.40%	37366661
chr1	183174450	93.71%	2891571
chr2	169232250	92.93%	2671632
chr3	148593400	92.85%	2325162
chr4	142499700	91.05%	2229695
chr5	139338850	91.77%	2203987
chr6	139286350	93.02%	2179929
chr7	129177900	88.82%	1935363
chr8	119721950	92.52%	1916334
chr9	116580150	93.57%	1857516
chr10	121199150	92.73%	1913321
chr11	115020050	94.21%	1862739
chr12	109953750	91.53%	1695792
chr13	110929650	92.12%	1730392
chr14	110800850	88.71%	1752986
chr15	96466050	92.72%	1525019
chr16	90573450	92.23%	1403654
chr17	87267650	91.87%	1343967
chr18	83873100	92.47%	1338525
chr19	56074500	91.28%	890291
chrM	12549	76.99%	247
chrX	131044950	76.62%	1596367
chrY	13191850	14.38%	102172
44 contigs with no values (5334105 bp)	0	0.00%	0

	segments	min	max	mean	median
segments	37366661	49	2500	64.6	50