Resource

Id	summary/zemke2023Conserved/pseudobulk_methylation/Mouse/L5-IT/CHNcontent_copy
Type	position_score
Version	0
Summary	Pseudo-bulk wc track in Mouse M1 region for L5-IT cell type
Description
Labels	assay: snm3C-seq brain_region: mop cell_type: L5-IT data_types: methylation_signal dataset: zemke2023Conserved measure: CHN modalities: DNA_methylation processing_level: processed reference_genome: reference/Mouse/genome/GRCm38 resolution: pseudo_bulk_cell_type species: mouse vendor: UCSD Single-cell Epigenomics Platform

Scores (1)

ID	Type	Default annotation	Description	Histogram	Range	Summary
zemke2023Conserved_Mouse_L5-IT_chn_mc	float	zemke2023Conserved_Mouse_L5-IT_chn_mc			[0, 1]	n 2,474,867,849 mean 0.0288 sd 0.0328

n counts base pairs; sd is the population standard deviation.

Chromosome	Covered positions	Covered %	Segments
all chromosomes	2474867849	90.63%	47031363
chr1	186392250	95.35%	3592993
chr2	171980450	94.44%	3316382
chr3	151398100	94.60%	2907762
chr4	145256300	92.81%	2786096
chr5	141834550	93.41%	2730539
chr6	141779700	94.69%	2723140
chr7	132239700	90.92%	2479084
chr8	121755650	94.09%	2350305
chr9	118334050	94.97%	2284498
chr10	123293000	94.34%	2378274
chr11	116442900	95.38%	2261205
chr12	112352500	93.53%	2140733
chr13	113083950	93.91%	2160678
chr14	113488550	90.86%	2175118
chr15	98082300	94.27%	1894598
chr16	92191800	93.87%	1774075
chr17	88871300	93.56%	1692358
chr18	85218900	93.95%	1648697
chr19	56903700	92.63%	1096079
chrM	12749	78.22%	253
chrX	144986950	84.77%	2435120
chrY	18968500	20.68%	203376
44 contigs with no values (5334105 bp)	0	0.00%	0

	segments	min	max	mean	median
segments	47031363	49	1350	52.62	50