Resource

Id	summary/zemke2023Conserved/pseudobulk_methylation/Mouse/L6-IT/CHNcontent_copy
Type	position_score
Version	0
Summary	Pseudo-bulk wc track in Mouse M1 region for L6-IT cell type
Description
Labels	assay: snm3C-seq brain_region: mop cell_type: L6-IT data_types: methylation_signal dataset: zemke2023Conserved measure: CHN modalities: DNA_methylation processing_level: processed reference_genome: reference/Mouse/genome/GRCm38 resolution: pseudo_bulk_cell_type species: mouse vendor: UCSD Single-cell Epigenomics Platform

Scores (1)

ID	Type	Default annotation	Description	Histogram	Range	Summary
zemke2023Conserved_Mouse_L6-IT_chn_mc	float	zemke2023Conserved_Mouse_L6-IT_chn_mc			[0, 1]	n 2,477,592,799 mean 0.0313 sd 0.0338

n counts base pairs; sd is the population standard deviation.

Chromosome	Covered positions	Covered %	Segments
all chromosomes	2477592799	90.73%	47842014
chr1	186517450	95.42%	3642342
chr2	172092150	94.50%	3362229
chr3	151517950	94.68%	2951909
chr4	145382050	92.89%	2825428
chr5	141949200	93.49%	2768454
chr6	141885750	94.76%	2764446
chr7	132425450	91.05%	2532202
chr8	121837350	94.15%	2380930
chr9	118390550	95.02%	2313664
chr10	123374400	94.40%	2409385
chr11	116495450	95.42%	2286732
chr12	112455500	93.61%	2173766
chr13	113177000	93.98%	2196432
chr14	113620250	90.97%	2209319
chr15	98148750	94.33%	1918038
chr16	92255300	93.94%	1798150
chr17	88937150	93.63%	1724210
chr18	85266250	94.01%	1668453
chr19	56939700	92.69%	1111502
chrM	12599	77.30%	252
chrX	145384300	85.00%	2579468
chrY	19528250	21.29%	224703
44 contigs with no values (5334105 bp)	0	0.00%	0

	segments	min	max	mean	median
segments	47842014	49	1150	51.79	50