Resource

Id	summary/zemke2023Conserved/pseudobulk_methylation/Mouse/Lamp5/CHNcontent_copy
Type	position_score
Version	0
Summary	Pseudo-bulk wc track in Mouse M1 region for Lamp5 cell type
Description
Labels	assay: snm3C-seq brain_region: mop cell_type: Lamp5 data_types: methylation_signal dataset: zemke2023Conserved measure: CHN modalities: DNA_methylation processing_level: processed reference_genome: reference/Mouse/genome/GRCm38 resolution: pseudo_bulk_cell_type species: mouse vendor: UCSD Single-cell Epigenomics Platform

Scores (1)

ID	Type	Default annotation	Description	Histogram	Range	Summary
zemke2023Conserved_Mouse_Lamp5_chn_mc	float	zemke2023Conserved_Mouse_Lamp5_chn_mc			[0, 1]	n 2,454,427,149 mean 0.0229 sd 0.0337

n counts base pairs; sd is the population standard deviation.

Chromosome	Covered positions	Covered %	Segments
all chromosomes	2454427149	89.88%	40238187
chr1	185440400	94.87%	3097084
chr2	171137100	93.97%	2881990
chr3	150571400	94.08%	2510281
chr4	144337000	92.22%	2417678
chr5	141021200	92.88%	2366892
chr6	141010850	94.17%	2346403
chr7	131035600	90.10%	2113364
chr8	121106400	93.59%	2052555
chr9	117793250	94.54%	1989699
chr10	122648400	93.84%	2056898
chr11	116017400	95.03%	1990596
chr12	111537700	92.85%	1844299
chr13	112360900	93.31%	1850345
chr14	112530800	90.10%	1876841
chr15	97615950	93.82%	1644586
chr16	91726200	93.40%	1527214
chr17	88340400	93.00%	1438764
chr18	84815800	93.51%	1437427
chr19	56662950	92.24%	958301
chrM	12599	77.30%	248
chrX	140910750	82.39%	1702493
chrY	15794100	17.22%	134229
44 contigs with no values (5334105 bp)	0	0.00%	0

	segments	min	max	mean	median
segments	40238187	49	2050	61	50